Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4714 |
Symbol | |
ID | 3521418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4988188 |
End bp | 4990836 |
Gene Length | 2649 bp |
Protein Length | 882 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637287153 |
Product | hypothetical protein |
Protein accession | YP_271358 |
Protein GI | 71280949 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGATTGT TTAAATTTAC CTTAGCCATA TCTTTGGTCT TTGTTATCAC ACTCAGTGCG GTATTTTATA GTCGAAGCTC GGTGGTGACA GCAATAGTAA ATAATTATCT GACTGAGCAT AATAGTGAGT TAACCTGTAT TGATTTTGAA GTAAATAACA ACTTTGATTT ACTGATCACC CGTATATGTA TTGATTCTCC TTATGCGGAA ATAGAATTAA TTGGTAGTCT GGTAGAATGG CGATTTGAGC CCAGCAAGTT AGACGTAGAT AATATAGCCG ACGCTATTTC AGCGATAAAT ATTGATGTAG CTACGGTACG TGCTAAAGGT GATTTTCAAT TCCCTGAAAA CCCTACTTCA AGTAACGTAA AATTCAGTGA GTTACCCACA CTTATTAGAA AAAAAATTAA TGACCTTGCG TTGATATCCA TTCCAGTTGA AATTGATATC AAAACCTTTA GCTACCAACC CTTTACTAAT AAAAAAACTA ATAAACAAAC CCATCAAAAA GCTAATAAAA ACCACACTTA TCAAGGGCAA TTTTCAGCCA ATGCTCAGCA GCTCGCATTC TCTTTAGCTA ATCAAAAGAA TGAAAGTGTT CTTGCTTTGG CGTTAACTAA AAATGGTGAT GAGATTCGTG CTAGTTTAGC GACAGATTTA GCAAAGCTCA GGCCATTTCT CGTCAGACAC CAAAGAGCTT TGCCTCTTAG TTTATCAACA CTCTTGCTCG ATGACTCTTG GATTGCTGCG GGGAAACTTA ATAGCCAACT TGATTGGCAA CAGCAAACCT TGGCTCTGAC CAATCAAATG ACTGATTTTT CTTTCGAGGC ATCACAAGGT TTTTCTTCAT TAGGGCCGAT TGAGCTAGAG ACAACATTGT CGTGGCAAAC AGCTTTAGTG GGAGAAACCC TACAATTTGA CTTTACTCAT AAAGATTACC AGCGTAATAA CATACAGTTA GTTTTTAATG CAGAAAAGTT ACTTGAGCAA CTCACAGCGC AAACAGTGGA CCAGCAGATA ATAAACGTGC TCACAGACAA TGCTATAAAT TCCTTAACAG TTCAGTCATT GGGTTCGCTA ACAATTGACT TTGCCCAGCA ATCTATAGCC AGCGATAGCC TTGATATTGT TAGTAGAAAT TTATATGGGC CAATAAAACT CTCGTTAAAC GATGTACTCT TTAATTTTAA TGATGATCCA GCAATAACAA CTAACTTACA AAAAGCAAAA TTATCACTGA CAGGAGCAGC AAGCATTGCT CAATTACAGC CTTATAGCAG ACAGCCAGTA AAGGTAAGTG TCATAGGGGA AATTGTGCAG TACAGTGATA TTTGGCAGCT AACACTTGCC CAAGGCACGG CAATCGAATT AGCTCAGCTC AGCTTACCGT CAAATAAGTC AGTTATTGAA CCGATAAGGA AATCTCAACA ATCAACCCCC AATGCTCAAC CGAATATAAA ATCGTTAATC AGTCATTGGC AAGGTAAAGT GTCGATTGCT AAAAATGACA ATCAACCTCA GTCTAAAAAT AGTGAATCAG TGACGTTTGC ATTAGATATT AACAGTCAGA TAAAACAGCT AAATTATCCT AATATATTGA AAGTTGATGA ACTTGAGTTA ACTACAAAGC TCAGTGGAAA TATTGAAGAG ATAACGATAA ATACTAAAGT GATTGCCGAT GATGTACCCA TAGCGACCGC TATCTTAATG GGGGATTTAC GTCATCCGAG TGTGATTGTG TCGGCACAAG ATGTGTTGCT TACTGATTTA TTAGCTTTGA AGTTGAAACT ACCTGTTGAG TTGAAGCTTA TTGATGGCAA TATCGACTAT CACTTAAGCG GACAGTTAAA AAATAGTGAT GACCTATTAG CTAATCCAAT GATACTCACA CTAACGGTAC AAGATGTTAC TGGGGAAGTT GATGGTACTT GGCTACAAGA GCTTAACTGG CAACAAAAGC TGCAGTTACA AAATGGTGAG ATAAAATCGA GACCAGACCA GACTAAAACG TCATCTAATC TGACCATTGC CAAGATAGAA ACGGCGACAC CCATTAATAA TTTTTCAACA AGAACTTATA TCGACTTTTC ACAAGATAGA CTGAAATTAT TAGCACATAA TATTCGCGGA CACTTATTAG GTGGACGTTT TGATATACCA CAAGTTCAGT GGCCTTTTAG GAAAGATCTG CCAGTGAAAG TAGCACTAAC TAAAATAGAT TTAGAAAAAC TACTCGAGTT AGATAAAAAG CAAGGTATAG TCGTGACAGG AAAAGTCTCA GGGCAGTTAC CCATTCAATA TGATGGTGAA AACTTTCTCA TCAAAGGCGG TAGCATAAAA AATGTCGGTG ACGGTATTAT CCAAGTTTAT AATAACCCCG CGGTTGAAGA ACTAAAAGCC AGTAGCACTG AATTAAAGCT GGCGTTTAGC GCCTTGGAAA ACTTGCACTA CCATCATCTC TCATCAGAAG TTTCGATGGC GGATGACGGC TATATGTTAT TAGATACAGC CATTAGGGGC CGAAATCCTG ATTTGGACAA TGATGTAAAT TTGAATTTAA ATCTTAGCTA TGATTTATTA GGCTTAATTG AATCACTCAA TATTACCGAG GATTTTGAAA GCAAAATTAT CAAAGGGTTA TACCCATGA
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Protein sequence | MRLFKFTLAI SLVFVITLSA VFYSRSSVVT AIVNNYLTEH NSELTCIDFE VNNNFDLLIT RICIDSPYAE IELIGSLVEW RFEPSKLDVD NIADAISAIN IDVATVRAKG DFQFPENPTS SNVKFSELPT LIRKKINDLA LISIPVEIDI KTFSYQPFTN KKTNKQTHQK ANKNHTYQGQ FSANAQQLAF SLANQKNESV LALALTKNGD EIRASLATDL AKLRPFLVRH QRALPLSLST LLLDDSWIAA GKLNSQLDWQ QQTLALTNQM TDFSFEASQG FSSLGPIELE TTLSWQTALV GETLQFDFTH KDYQRNNIQL VFNAEKLLEQ LTAQTVDQQI INVLTDNAIN SLTVQSLGSL TIDFAQQSIA SDSLDIVSRN LYGPIKLSLN DVLFNFNDDP AITTNLQKAK LSLTGAASIA QLQPYSRQPV KVSVIGEIVQ YSDIWQLTLA QGTAIELAQL SLPSNKSVIE PIRKSQQSTP NAQPNIKSLI SHWQGKVSIA KNDNQPQSKN SESVTFALDI NSQIKQLNYP NILKVDELEL TTKLSGNIEE ITINTKVIAD DVPIATAILM GDLRHPSVIV SAQDVLLTDL LALKLKLPVE LKLIDGNIDY HLSGQLKNSD DLLANPMILT LTVQDVTGEV DGTWLQELNW QQKLQLQNGE IKSRPDQTKT SSNLTIAKIE TATPINNFST RTYIDFSQDR LKLLAHNIRG HLLGGRFDIP QVQWPFRKDL PVKVALTKID LEKLLELDKK QGIVVTGKVS GQLPIQYDGE NFLIKGGSIK NVGDGIIQVY NNPAVEELKA SSTELKLAFS ALENLHYHHL SSEVSMADDG YMLLDTAIRG RNPDLDNDVN LNLNLSYDLL GLIESLNITE DFESKIIKGL YP
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