| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4704 |
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| Symbol | |
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| ID | 3521251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4978954 |
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| End bp | 4980405 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637287143 |
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| Product | sigma-54 dependent DNA-binding response regulator |
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| Protein accession | YP_271348 |
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| Protein GI | 71280782 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGAAAG AAGGAAAAAT TCTCATTGTT GATGACGATG AAGATATTTT AACGGCAGGT
AAGTTATTAC TAAAACGCCA CTTTTCACAG GTAAGTACCT GCAATGTACC TGAACACATT
CCTCGCTTTA TTAACGATCA GCATTTTGAT GCCATTATTT TGGATATGAA TTTTGGTCCG
GGTGAAAGCT CTGGTGCGCA GGGATTTTAT TGGCTACAAA GGATATTAGA AATTAAGCCA
GAAAGCGTCA TTATCATGAT CACCGCCCAT GGTGGCGTTA ATGTGGCAGT TGAAGCAATG
AAGCTAGGCG CCACCGATTT TATTGCCAAA CCTTGGCAAA ATGAAAAAGT TATCGCAACG
GTATCAACTG CAGTTTTACT GGGCAGAAGC CGTAGTGAAA CGCAAAAATT ACGTGAAACC
AATAAAGTAT TAGTACAAGC GAGTAACCCG GCAAGCCAGC AAAATATGCT CGGCCAATCT
CAAGCGATGC AGCAAATACA ATCGTTAATC GCTCGATCTG CACCAACTGA AGCTAATGTG
ATGATATTGG GTGAAAATGG GACTGGCAAA GAGTTAGTTG CCCGAGAGAT ACATCAACAA
AGCGCTCGCG CTCAACAAGT GTTTATGTCT GTTGATTTAG GCGCAATCAG CGAAACTTTA
TTCGAAAGTG AATTATTTGG TCATAAAAAG GGTTCTTTTA CTGGCGCACA ACAAGATAGA
GTTGGCCGGT TACAAGCGGC AGATGGTGGT ACCTTATTTT TAGATGAGCT AGGAAACCTA
CCTCTTCATC TACAAGCAAA ATTACTGACT GTATTAGAGC AGCGAAAAGT CACCCCCCTG
GGTGCAAATA AAGCTATCGC CTTTAATGTT AGGGTCGTGT CAGCAACTAA CTTATCTAAA
GAAACGTTAA AAGATGAACA GCATTTCCGA CAAGATTTAT TATTTAGACT CAACACCGTT
GAAATTAATT TGCCGCCTTT GCGCGAACGT AGCAGCGATA TAACATTACT AGCCAGCCAT
TATGTCGACT TTTACGCAAA AAAATATCAG CAACAAGGTA AAGGTGTTAA ACAGTTGAGT
GATGACGCAT TAGCAGCAAT ATCCTCTTAT TCATGGCCCG GTAACATCAG AGAACTGCGC
CACGCAATTG AGCGTGCGAT GATATTAAGC CAATCTGAAA TGCTGACTTC GGGTGATTTT
CAGCTTGATG TCCCTAGCCA TGTTAAACCA AGCCAATCGG CATCAACTTC AAAGCACAAG
GTAATAACAA ATCAGTTTGA AACAACCAGC GCTGAGATAA TGCTACCAGA AGAGCTGAAT
TTAGAGCAAA TTGAGAAAAA TGCTATCGCT TTAGCCCTTA AAAAGCATCG ATTTAATATA
AGTCATACCG CAAAAGAACT TGGCTTAACA CGTGCTGCAC TCTACCGCCG GATGGAAAAA
CATGGACTTT AA
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| Protein sequence | MKKEGKILIV DDDEDILTAG KLLLKRHFSQ VSTCNVPEHI PRFINDQHFD AIILDMNFGP
GESSGAQGFY WLQRILEIKP ESVIIMITAH GGVNVAVEAM KLGATDFIAK PWQNEKVIAT
VSTAVLLGRS RSETQKLRET NKVLVQASNP ASQQNMLGQS QAMQQIQSLI ARSAPTEANV
MILGENGTGK ELVAREIHQQ SARAQQVFMS VDLGAISETL FESELFGHKK GSFTGAQQDR
VGRLQAADGG TLFLDELGNL PLHLQAKLLT VLEQRKVTPL GANKAIAFNV RVVSATNLSK
ETLKDEQHFR QDLLFRLNTV EINLPPLRER SSDITLLASH YVDFYAKKYQ QQGKGVKQLS
DDALAAISSY SWPGNIRELR HAIERAMILS QSEMLTSGDF QLDVPSHVKP SQSASTSKHK
VITNQFETTS AEIMLPEELN LEQIEKNAIA LALKKHRFNI SHTAKELGLT RAALYRRMEK
HGL
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