Gene CPS_4680 details

Gene Information

• Locus tag: CPS_4680
• ID: 3523304
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 4948223
• End bp: 4948888
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637287119
• Product: hypothetical protein
• Protein accession: YP_271324
• Protein GI: 71278946
• TIGRFAM ID: [TIGR02001] conserved hypothetical protein, proteobacterial

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.467996
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAA TTAAATTGTT AGCAGCAACA TTCGCGCTTA CGGCTATAGC TCCACTCGTC 
TCTGCAGAAG TCAGTGTTAC AGGAACATTA ACGTCGGATT ATGTATTTAG AGGTGTTAGT 
CAAACAGATA GCTCTCCGGC TATTCAGGCG AGTTTAGATT ACGAACATGA AAGTGGATTT 
TTTGCCGGCG TTTGGGCGTC AAATGTTGAC TTCGAAGACG ATGCAAATGC AGAAATTGAT 
TTCTACGCGG GTTACTTTGG CGAAATTAAT GACACTTTTT CTTATGATGT TATGTATAAC 
TACTACACCT ATCAAGGTTA CAGTTCAGCA GATGATTCTG ATTACGGCGA ATTTCTTTTC 
AATGCTTATA TTAACTCATT CACGTTAGGC CTTGGTTATG CTTCTGATTA TGTAAATACC 
GGTGATTCAG CACAGTATAT TTCAGCAGCT TATGATATCG AACTTCCTAA AGAGTATGCC 
TTAACTTTAC AAGCTGGCTA TACCATGGGT GATGCATTTG ACGATGCCGA GTATGTAGAT 
TATAGCGCAA CAGTTGCAAA AACATTTTTT GACTTTGATT TTACTGCTGC CGTAATAAAT 
ACCGATATTG ATGATGCTGA CAATGCAGAT TTTCGATTTG TTTTAGGTGT TTCACGCACA 
TTTTAA 

 

Protein sequence

MNKIKLLAAT FALTAIAPLV SAEVSVTGTL TSDYVFRGVS QTDSSPAIQA SLDYEHESGF 
FAGVWASNVD FEDDANAEID FYAGYFGEIN DTFSYDVMYN YYTYQGYSSA DDSDYGEFLF 
NAYINSFTLG LGYASDYVNT GDSAQYISAA YDIELPKEYA LTLQAGYTMG DAFDDAEYVD 
YSATVAKTFF DFDFTAAVIN TDIDDADNAD FRFVLGVSRT F