Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4676 |
Symbol | |
ID | 3520998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4943747 |
End bp | 4945030 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637287115 |
Product | oxidoreductase, FAD-dependent |
Protein accession | YP_271320 |
Protein GI | 71280532 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCACG TTTCCCACAC AGGCTCTTAT TATGCGGCAA GTGCTAATGA TAAAGTTCAG CGATCAAAGC TGACAGAAGA TATTACTGCC GACATTTGCG TTGTTGGTTC TGGTTTTACT GGATTATCAA GCGCATTACA TTTGGCTGAA AAAGGCTTCA AAGTGGTGGT TGTTGAAGGC AGTCGCATTG GTTTTGGCGC TTCAGGTCGC AACGGCGGCC AGTTAGTTAA TAGTTATAGT CGAGATATGG ACTTTATTGA ACGTAATTAT GGCAAACATG TTAGTACTGA AATGGGACAA ATGGCCTTTG AAGGTAGTCG AATAATTAAA CGTTTAATTA ACGATTACGA CATCAAATGT GATTTAAGAC CAGGAGGTGT TTTTGCCGCT TGTAACAGCA AACAGCTGGA TGAAATGGCT GAAAAGCAAA AACTGTGGGC TAAGCATGGC TACCATGAAA CTGAGCTATT AAGTGCAAGT GACATTCAAA ATCATGTCGG TACTGAACGT TACGTGGGAG GATTATTAGA TAAAGCAGGT GGTCATATTC ATCCTCTCAA CTTAGCCCTT GGTGAAGCTG CTGCGTTTGA AAAGTTAGGT GGAATAATTT ACGAAGACAG TATTGTTGTT GATATTGTTC ATGGTAAAAA AGCGGTCATT AAAACAGACT CAGGTAGTGT AACGGCTGAT TTTGTTGTTG TAGCTGGTAA TGCTTATTTA GAAGGGCTTT TACCTAAGCA ACAGAAACAA TCAATGCCAT GTGGAACGCA AATAATTACC ACTGAAGTCT TACCAGAAGC CATGCAAAAG CAATTATTAC CGACCGATGT CTGCGTAGAA GATTGTAACT ACCTATTAGA TTACTTCCGC TTATCAGGCG ATGGTCGTCT GATCTACGGT GGTGGCACAA CTTATGGGGC GAGAGAGCCT TCTAAAATAG AATCAATTAT CATTCCTAAA ATGTTAAAAA CATTCCCTCA ACTCAAAGAT GTGAAGATTG ATTATGCCTG GACAGGTAAC TTTTTACTGA CGTTAATGCG ATTACCACAA TTTGGCCGTA TAAATGACAA TGTCTATTAT GCTCAAGGCT ATAGTGGCCA TGGTGTAACT TCGACCCACT TAGCCGGTAA AGTTATTGCC GATGCAATTA CTGGCCAAGC AGAACGCTTT GATGTATTTG CTGGCTTACC TCAATATCCA TTCCCAGGTG GTAGGTTATT TAAAACGCCT TACACCGCGA TGGGTGCTTG GTATTACCAG ATGAGAGATA AGTTAGGTAT CTAA
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Protein sequence | MNHVSHTGSY YAASANDKVQ RSKLTEDITA DICVVGSGFT GLSSALHLAE KGFKVVVVEG SRIGFGASGR NGGQLVNSYS RDMDFIERNY GKHVSTEMGQ MAFEGSRIIK RLINDYDIKC DLRPGGVFAA CNSKQLDEMA EKQKLWAKHG YHETELLSAS DIQNHVGTER YVGGLLDKAG GHIHPLNLAL GEAAAFEKLG GIIYEDSIVV DIVHGKKAVI KTDSGSVTAD FVVVAGNAYL EGLLPKQQKQ SMPCGTQIIT TEVLPEAMQK QLLPTDVCVE DCNYLLDYFR LSGDGRLIYG GGTTYGAREP SKIESIIIPK MLKTFPQLKD VKIDYAWTGN FLLTLMRLPQ FGRINDNVYY AQGYSGHGVT STHLAGKVIA DAITGQAERF DVFAGLPQYP FPGGRLFKTP YTAMGAWYYQ MRDKLGI
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