Gene CPS_4676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4676 
Symbol 
ID3520998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4943747 
End bp4945030 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content41% 
IMG OID637287115 
Productoxidoreductase, FAD-dependent 
Protein accessionYP_271320 
Protein GI71280532 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCACG TTTCCCACAC AGGCTCTTAT TATGCGGCAA GTGCTAATGA TAAAGTTCAG 
CGATCAAAGC TGACAGAAGA TATTACTGCC GACATTTGCG TTGTTGGTTC TGGTTTTACT
GGATTATCAA GCGCATTACA TTTGGCTGAA AAAGGCTTCA AAGTGGTGGT TGTTGAAGGC
AGTCGCATTG GTTTTGGCGC TTCAGGTCGC AACGGCGGCC AGTTAGTTAA TAGTTATAGT
CGAGATATGG ACTTTATTGA ACGTAATTAT GGCAAACATG TTAGTACTGA AATGGGACAA
ATGGCCTTTG AAGGTAGTCG AATAATTAAA CGTTTAATTA ACGATTACGA CATCAAATGT
GATTTAAGAC CAGGAGGTGT TTTTGCCGCT TGTAACAGCA AACAGCTGGA TGAAATGGCT
GAAAAGCAAA AACTGTGGGC TAAGCATGGC TACCATGAAA CTGAGCTATT AAGTGCAAGT
GACATTCAAA ATCATGTCGG TACTGAACGT TACGTGGGAG GATTATTAGA TAAAGCAGGT
GGTCATATTC ATCCTCTCAA CTTAGCCCTT GGTGAAGCTG CTGCGTTTGA AAAGTTAGGT
GGAATAATTT ACGAAGACAG TATTGTTGTT GATATTGTTC ATGGTAAAAA AGCGGTCATT
AAAACAGACT CAGGTAGTGT AACGGCTGAT TTTGTTGTTG TAGCTGGTAA TGCTTATTTA
GAAGGGCTTT TACCTAAGCA ACAGAAACAA TCAATGCCAT GTGGAACGCA AATAATTACC
ACTGAAGTCT TACCAGAAGC CATGCAAAAG CAATTATTAC CGACCGATGT CTGCGTAGAA
GATTGTAACT ACCTATTAGA TTACTTCCGC TTATCAGGCG ATGGTCGTCT GATCTACGGT
GGTGGCACAA CTTATGGGGC GAGAGAGCCT TCTAAAATAG AATCAATTAT CATTCCTAAA
ATGTTAAAAA CATTCCCTCA ACTCAAAGAT GTGAAGATTG ATTATGCCTG GACAGGTAAC
TTTTTACTGA CGTTAATGCG ATTACCACAA TTTGGCCGTA TAAATGACAA TGTCTATTAT
GCTCAAGGCT ATAGTGGCCA TGGTGTAACT TCGACCCACT TAGCCGGTAA AGTTATTGCC
GATGCAATTA CTGGCCAAGC AGAACGCTTT GATGTATTTG CTGGCTTACC TCAATATCCA
TTCCCAGGTG GTAGGTTATT TAAAACGCCT TACACCGCGA TGGGTGCTTG GTATTACCAG
ATGAGAGATA AGTTAGGTAT CTAA
 
Protein sequence
MNHVSHTGSY YAASANDKVQ RSKLTEDITA DICVVGSGFT GLSSALHLAE KGFKVVVVEG 
SRIGFGASGR NGGQLVNSYS RDMDFIERNY GKHVSTEMGQ MAFEGSRIIK RLINDYDIKC
DLRPGGVFAA CNSKQLDEMA EKQKLWAKHG YHETELLSAS DIQNHVGTER YVGGLLDKAG
GHIHPLNLAL GEAAAFEKLG GIIYEDSIVV DIVHGKKAVI KTDSGSVTAD FVVVAGNAYL
EGLLPKQQKQ SMPCGTQIIT TEVLPEAMQK QLLPTDVCVE DCNYLLDYFR LSGDGRLIYG
GGTTYGAREP SKIESIIIPK MLKTFPQLKD VKIDYAWTGN FLLTLMRLPQ FGRINDNVYY
AQGYSGHGVT STHLAGKVIA DAITGQAERF DVFAGLPQYP FPGGRLFKTP YTAMGAWYYQ
MRDKLGI