Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4675 |
Symbol | |
ID | 3521668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4941272 |
End bp | 4943377 |
Gene Length | 2106 bp |
Protein Length | 701 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637287114 |
Product | methyl-accepting chemotaxis protein |
Protein accession | YP_271319 |
Protein GI | 71281197 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.595763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT CCGTAAAAAC AAAAATTATT TTTTCCACCC TGTTATTACT TATCATCACA ATAACCTCAT TATTAATCGT CTCTTCAATC TCTGTTGATA AAACCGCAAC CTCTTTATCT GAATACCTAC AACCAAAAAT TAAAGAAAGC AGTTTAATGC CAATGGTTAT TGCGGCAGAC GCTGAAACGG CAAGAAATGA AGTATTTTTT GACCAAGTAA TCAATGAGGC TGATCGCCTT GCAAGTGACA TTGCGTTTTT ACGGGTACAA TTTCGCGCGC TTTTTTTATC TGCTGAAGAT GTTCGCCATA TTTTAAATAT GTACATAAAA AGTGCTATAG AAAGTAATCA ATCAGCCGTT GGCGTATATG CTGTTTTTCT TCCCAATGCA CTTGATGGTG CTGATGAAGC AAATAAAGGT GCAGACGATC TAGCAACAAA TGAAGCAGGA AGATTTGCTG TTTATTGGGC TTTGAACGAA CAAGGTGAAG CTATTGAAGA AATAATGCCT GAGGAGATGA TTAACGATAC CAGTCCTAAT TCAACTGGAC AACCCTATAA CTCCTGGTTT ACTTGCCCTA TTGAAAAACA ACAAAATTGT TTATTAGAAC CCTATATAGA CAAAGTTGAT GGTAAAAACA TATTAATGAC TTCAATAGCG ATACCAATTA AATTCGCGAA TAAAGTCGTT GGTGTTGTCG GTATTGATAT CGCGTTAGCT GATATCCAAA CAAAAGCAGA AGCGTTCTCA ACTAAAATTG CGGATGGCAA CAGCCGAGTA TTGATTGTAT CTGAAGATAA CTCGGTGATA GCTGATTCTA ACAATAGTGC TAATCAAGGT GCTTTATTTT CTGAAATAAT TAATAGTACT CAGTTAAATG AAGGCATTAG TGAGAATGAT CGCAGTTTTA CTTTGGTGAA ACGTATTCAT TTAGGTGGCA TCACTCAGTG GAGTATTTAT ACCGAAATAC CTAAACAATA TATTACTGAT GAAGTAAATC AGACCATGAC TGTGTTAGAT AAAGGCACTG AAGACCAGTT TACCAGTGTT CTGTATATGA GTTTATTGGT GTTAATCATA GGTAGTATTG TAATCTTTTT CATGGCTGAA AAATTGACAG TACCCTTAAG AGCTGTGGCG GACGCTTTAA AACAAATAGC CAGTGGTGAT GCTGATTTAA CTCAACGTAT CAAAGTTAAT TCAAAAGATG AAACGGGTCA GCTTGCCCAT TCGTTTAACC AGTTTGTAGA AGGGCTGGCA AGTATTGTAG GTCAGTTTTC AGAAGGCGTT AAAACCACCT TTTCGGCCTC TGAAACAGGT AAAGCGTTAT CGACAACAAC TAACTCACAA TTAGCTAGCC AACAGTTAAT GATTGAAATG GTCGCGACGG CAGCAGAGGA AATGTCGCAA ACCTCTACCG ATGTTGCGCA AAATGCGGTT TCAACTGCTG ATGCGACTAA AGAAGTTAGA AGTGCAGCTT CAAATGGTAT TATTAAATTA AAACAAACCA CCAGCACCAT TTCAAAACTG GCAGAACAGA TGCAGTATTC AAACGAGCAA GTAGATAAGC TGTCAACCAA TAGCGATAAT ATTGTTAATG TACTCAACGT GATTAAGTCA GTTGCAGAAC AAACTAATTT ACTTGCCTTA AACGCAGCCA TCGAAGCCGC AAGAGCAGGT GAATTAGGTC GTGGTTTTGC GGTTGTTGCT GATGAAGTAA GGGCACTCGC GGGTAGAACG GCCAGCTCGG TATTTGAAAT TGAAGGCGTC GTTAATGAGT TACAAGTTTC AACGAAAGAA ATGGTGGCAA CTATCAGTGA AAACGTTAAA AGAGCCGAGG CTTGCACTGA ACAAGCACAG GAAACGCAAA CGATCTTTGA AGTTATTGAA CAAGAAGTGA CTAACATGAC GGATATGGCG GCAAATATTG CTTCTGCCGC TGAAGAGCAA AGTCATGTTT CAGAAGAGAT CAGTAGCACC TTACAGAATA TAAATACCAC CACTGACGAG CTTACGCAAA GTGCTCAGCA GACCTTAAAA GTGAGTGAAG AGCTGTTGGT ATCAGGACAA GATCAAGAAC AACTCATCGG GCGATTTAAG TTTTAG
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Protein sequence | MNKSVKTKII FSTLLLLIIT ITSLLIVSSI SVDKTATSLS EYLQPKIKES SLMPMVIAAD AETARNEVFF DQVINEADRL ASDIAFLRVQ FRALFLSAED VRHILNMYIK SAIESNQSAV GVYAVFLPNA LDGADEANKG ADDLATNEAG RFAVYWALNE QGEAIEEIMP EEMINDTSPN STGQPYNSWF TCPIEKQQNC LLEPYIDKVD GKNILMTSIA IPIKFANKVV GVVGIDIALA DIQTKAEAFS TKIADGNSRV LIVSEDNSVI ADSNNSANQG ALFSEIINST QLNEGISEND RSFTLVKRIH LGGITQWSIY TEIPKQYITD EVNQTMTVLD KGTEDQFTSV LYMSLLVLII GSIVIFFMAE KLTVPLRAVA DALKQIASGD ADLTQRIKVN SKDETGQLAH SFNQFVEGLA SIVGQFSEGV KTTFSASETG KALSTTTNSQ LASQQLMIEM VATAAEEMSQ TSTDVAQNAV STADATKEVR SAASNGIIKL KQTTSTISKL AEQMQYSNEQ VDKLSTNSDN IVNVLNVIKS VAEQTNLLAL NAAIEAARAG ELGRGFAVVA DEVRALAGRT ASSVFEIEGV VNELQVSTKE MVATISENVK RAEACTEQAQ ETQTIFEVIE QEVTNMTDMA ANIASAAEEQ SHVSEEISST LQNINTTTDE LTQSAQQTLK VSEELLVSGQ DQEQLIGRFK F
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