| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4583 |
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| Symbol | gspL |
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| ID | 3521874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4836837 |
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| End bp | 4838189 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637287022 |
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| Product | general secretion pathway protein L |
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| Protein accession | YP_271230 |
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| Protein GI | 71281402 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3297] Type II secretory pathway, component PulL |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.760414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAGAAA CATTATTTAT CCGTCTAGGA AGTCAAGCAC ACGATACCGT TCATTGGTTA
GTCGTGGCTG AAACTAGCAG CAATACGCAG GAAATTATAG CGAGTGGTGA GCTAAAAGGT
GCTCAGCAAC TCAGTGAGCT TACTAGCAAA GCTGATAAGC GGCAGGTGAA AATATTGGTG
CCTGGCTGTG ATGTACTGTT AAAGTCGTTA AAAGTTCCAG CAAAATCTTC CAGAGCAATA
CGCTTAGCAA CGCCCTATAT GTTAGAAGAT AGCTTGGCAG AAGACGTTGA ACAGCTATTT
TTTGCTTATG CAGATTTGGC TAGTGATGAG CAGGGAAATA ATTGTTTTAC TGCAATAGTT
GCTCATAGCC AGATGCAACA ATGGTTATCA TGGTTGGCGG ATGCGGACAT TGAAACTGAT
ACGATTTTGC CTGATGTATT GGCTATGCCA ATTGTTGCTG AGGGTTGGAG TGCAATTGCA
CTTGGCGATG CTAATCAAGA GCAAGTGATT GTTCGTCAAA AACTTTGGCA GGGTTTTAAT
GTAGACGCCA ATGCATGGCA ATTACAATGT CAAACTTCAG CTAAGCAATC CGAGAATGCA
GAGGGTAATG AGCAGTCTCA TAGTATTCTT ATCGAGGCAT ATTCACCATT AGCTCATAGT
GAACAATGTA ATGTCAGTAC AATGCCTGAA GAATTAGCTT TAGCGCTTAT GGCGACGAAT
TATGACAGTA AATTAAGTCA CTTTAACTTA CTGCAAGGCC AATACAAGGT TAAAGAAAAC
CGTAGTCATA CCGGGCGACA GTGGTTATGG GTGGCAGGCG TTGCTATGTT TGCTATCTTG
CTTAGTTTAG GTCATAAAAG TGCGCAACTA TGGCAACTAA ATGCAGAGCA AGAAAATATT
CAACAAAATA TTGTTGCCAG TTATAAAAAA GCCTTTCCAA AAACAAAACG GGTTCGGATT
TCAACAATAA AATCTCAATT GAATAGAGAG CTAGCCTTAC TCGGCGGCGT TGGTGATAGG
CAAGGGTTTT TAGCTATGCT TGCTAAATTA CAACCTGCCT TTGCTAAAGT GCCCGCATTA
AAACCAGAGT CATTAAAGTT TGATGGTAAG CGACAAGAAT TGCGTATTCA AGCAACAGCA
AAAGATTATC AGGCTTTTGA ACAATTCAGT GTTGCGTTAG CAACAACCAA TTTGATTGTT
AAACAAGGCT CGCAAAGCAA TCAAGGTGAT CAAGTAACGG GTTCTTTTAG CATTACTAAT
AAAGGGAGCA CTAAAGGAGC GACGAAAAGA TCAAATAATA AAAAAGGCTC AGCCAAGCAA
CGAAGTAATG CCAGTAATAA GGAAGCATCA TAA
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| Protein sequence | MTETLFIRLG SQAHDTVHWL VVAETSSNTQ EIIASGELKG AQQLSELTSK ADKRQVKILV
PGCDVLLKSL KVPAKSSRAI RLATPYMLED SLAEDVEQLF FAYADLASDE QGNNCFTAIV
AHSQMQQWLS WLADADIETD TILPDVLAMP IVAEGWSAIA LGDANQEQVI VRQKLWQGFN
VDANAWQLQC QTSAKQSENA EGNEQSHSIL IEAYSPLAHS EQCNVSTMPE ELALALMATN
YDSKLSHFNL LQGQYKVKEN RSHTGRQWLW VAGVAMFAIL LSLGHKSAQL WQLNAEQENI
QQNIVASYKK AFPKTKRVRI STIKSQLNRE LALLGGVGDR QGFLAMLAKL QPAFAKVPAL
KPESLKFDGK RQELRIQATA KDYQAFEQFS VALATTNLIV KQGSQSNQGD QVTGSFSITN
KGSTKGATKR SNNKKGSAKQ RSNASNKEAS
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