| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4553 |
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| Symbol | tldD |
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| ID | 3520930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4802508 |
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| End bp | 4803953 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637286993 |
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| Product | tldD protein |
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| Protein accession | YP_271201 |
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| Protein GI | 71280464 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATAG TTGAAAAATC CTTATTAAGT GATAGTCATA TTGATGAAGA AATGTTGTCA
AAAACCCTAA ACAGTATGAT GGGACGACAA GTCGATTATG CTGATTTTTA TTTTCAAGCG
AGTCAGCATG AAACCTGGGT TTTAGAAGAT GGTATTGTCA AAGAAGGTTC ATATAACATT
GAACGTGGTG TTGGCGTAAG AGCCATTTCA GGCGAAAAAA CAGGCTTTGC TTATTCAGAT
GATATTACCC CTGAAGCACT TCAAAAAGCG GCAGATGCGG CAAAAGGTAT TGCAGATAGC
GGTACTGGTG CAAGTGTTAA AGCGTTTAGC CGTCAATCAC CTATTGAAGT TTATCAATCT
GTTGAACCAC TTGGCAGTTT AACGCAAGAG CAAAAAATTG ATTTATTGCA TCAAGTTGAA
GCACATGCGC GCCAAGTTGA TAGCCGTGTT AAGCAGGTTA TTGCCAGTAT ATCAGGTGTC
TATGAAACTA TTTTAGTGAG TGCAAGTGAT GGCACTTTTG GTACAGATAT TCGTCCATTA
GTTCGCTTAA ATTGTTCAGT ATTGGTTGAA GAAAACGGCA AGCGTGAGCG CGCAAGTGCT
GGTGGTGGTG CTCGTACAGA TTACAGTTAC TTTTTTGAAG TTGAAGCGGG AGATAACAAA
CCACGTTACC TTGCTTATGC TGAAGAATCT GTTAGACAAG CATTAGTTAA CTTAGTCGCC
ATTGAAGCAC CTGCTGGTAC TTTTCCTGTG GTATTAGGCG CAGGTTGGCC TGGTGTGTTA
CTACATGAAG CAGTAGGGCA TGGTTTAGAA GGTGACTTTA ACCGTAAAGG CTCTTCAGCG
TTCTCAGGTA AAGTTGGTCA ACAAGTGACT TCTGAGCTTT GTACCATTGT TGATGATGGT
ACATTAGCCA ATCGTCGCGG TTCAATATCT ATTGATGACG AAGGAACGCC TGGACAATAT
AATGTGTTGA TCGAAAAGGG CATATTAAAA GGCTACATGC AAGATAAGCA TAATGCTGGC
TTAATGGGCG TGAAACCAAC AGGTAACGGT CGACGTGAAT CGTATGCGCA CTTACCTATG
CCACGAATGA CTAATACGTA TATGTTAGCA GGGGAGTCTA GTCCTGAAGA TATTATTAAG
TCGGTTAAAA AAGGTATTTA TGCTCCAAAC TTTGCTGGTG GACAGGTAGA TATTACTTCA
GGGAAGTTTG TTTTTACCAG TTCAGAAGCC TACTTAATTG AGGATGGTAA AATAACGTCA
CCAGTTAAAG GCGCTACGCT AATAGGTAAT GGACCTGAGG CAATGAAACG GATCAGTATG
GTCGGTAATG ATTTAAAACT TGATGCGGGT GTTGGTGTTT GTGGTAAAGA TGGTCAAAGT
ATACCTGTAG GTGTTGGTCA ACCTACGTTA AAAGTTGATG AGATGACTAT CGGTGGTACG
CAGTAA
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| Protein sequence | MNIVEKSLLS DSHIDEEMLS KTLNSMMGRQ VDYADFYFQA SQHETWVLED GIVKEGSYNI
ERGVGVRAIS GEKTGFAYSD DITPEALQKA ADAAKGIADS GTGASVKAFS RQSPIEVYQS
VEPLGSLTQE QKIDLLHQVE AHARQVDSRV KQVIASISGV YETILVSASD GTFGTDIRPL
VRLNCSVLVE ENGKRERASA GGGARTDYSY FFEVEAGDNK PRYLAYAEES VRQALVNLVA
IEAPAGTFPV VLGAGWPGVL LHEAVGHGLE GDFNRKGSSA FSGKVGQQVT SELCTIVDDG
TLANRRGSIS IDDEGTPGQY NVLIEKGILK GYMQDKHNAG LMGVKPTGNG RRESYAHLPM
PRMTNTYMLA GESSPEDIIK SVKKGIYAPN FAGGQVDITS GKFVFTSSEA YLIEDGKITS
PVKGATLIGN GPEAMKRISM VGNDLKLDAG VGVCGKDGQS IPVGVGQPTL KVDEMTIGGT
Q
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