Gene CPS_4545 details

Gene Information

• Locus tag: CPS_4545
• Symbol: ptsN
• ID: 3522965
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 4796420
• End bp: 4796872
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637286985
• Product: PTS system, nitrogen regulatory IIA component
• Protein accession: YP_271193
• Protein GI: 71282490
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
• TIGRFAM ID: [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAATTAT CCGAAATATT AACAACAAGC TGTACTAGTT GTGATGTAGC AGTAACCAGT 
AAAAAACGTA TTCTAGAAAG AATTTGTCAA CTCGCTGCGA TTCAAATAAC TGATATAGAG 
CAAGATGAAC TATTAGATAG TTTACTCAAT AGAGAAAAAA TGGGTAGCAC TGGTATAGGT 
AACGGTATTG CGATCCCACA TGGTCGATTG CCCAATACAA GTAAAGCTGT TGCGGTGTTA 
ATAACAACAG AAAAGGCAAT CGATTTTGAT GCCATAGATA ATAGAGACGT AGATATTTTT 
GTTGCCTTAT TTGTGCCCGA AAATAGCTGC CAAGAACATT TAGATACGCT ACAAAATATT 
GCTAAACTAT TTAGTGATAA AAAGATGATC AAGCAAGTTC GAAAATGCAA TGATAATCAG 
GCACTCTATA ACTTAATTCA ACAAGCAAGC TAG 

 

Protein sequence

MQLSEILTTS CTSCDVAVTS KKRILERICQ LAAIQITDIE QDELLDSLLN REKMGSTGIG 
NGIAIPHGRL PNTSKAVAVL ITTEKAIDFD AIDNRDVDIF VALFVPENSC QEHLDTLQNI 
AKLFSDKKMI KQVRKCNDNQ ALYNLIQQAS