| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4538 |
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| Symbol | |
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| ID | 3521013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4790956 |
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| End bp | 4791921 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637286978 |
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| Product | KpsF/GutQ family protein |
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| Protein accession | YP_271186 |
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| Protein GI | 71280547 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATT TCAAAGAATT AGCAAAAAAC GTTATTGAGA TTGAACAGCA AGCTATCGCT
GAACTAGTAC AGTTTATTGA TGATAACTTT GAACTTGCCT GTCAACTCAT GTTTCATTGC
AAAGGACGAG TAATCGTCAT TGGCATGGGG AAATCAGGTC ATATTGGTGG TAAAATAGCG
GCTACGCTTG CTAGTACTGG CACACCATCA TTTTTTGTTC ACCCTGGAGA AGCTAGTCAT
GGCGATCTAG GCATGGTCAC CAGCAATGAT GTGGTTTTAA CCATTTCTAA TTCGGGTGAA
ACTAGTGAAG TACTTGCTAT AATTCCGGTT ATAAAGCGCA TCGGTGCTAA ATTAATTTCA
ATGACTGGCA ACACTGAATC TACCTTAGCT AAATTAGCCG ATACCCATGT TTGCATTAAA
GTATCGGCTG AAGCTTGTCC TCTTGGTTTA ACGCCAACAT CAAGTACCAC GGCAACCCTA
GTAATGGGTG ATGCATTAGC CGTTGCTTTA CTCAACGCGC GTGATTTTAC CGCAGAGGAT
TTCGCTTTAT CTCACCCTGG TGGCAGTTTA GGCAAACGTC TATTACTGCG CCTAAGCGAC
ATTATGCATA AAGACGATCG CGTACCTATG ATTTCGGAAA ATGCTCTTAT CAAAGACGCC
TTAGTTGAAA TGTCCTTAAA AGGCCTGGGC ATGACTGCTA TAGTTAATGA ACAACAACAA
CTAGTCGGTT TATTTACTGA TGGTGATCTT CGCAGGGTAT TAGACAATAG GATAGATATC
CACAGTGAAA GTATTAACAC AGTAATGACC CATAACCCTA GTGTAGCGCA GAGTGATATG
CTTGCCGCAC AGGCGCTAAA AATAATGGAA GATAAAAAAA TAAACGGCCT TATCATTGTC
GATAGCAACA ATATACCTGT AGGTGCAATG AATATGCATG ACTTCTTAAG TTCCGGAGTA
CTTTAA
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| Protein sequence | MKNFKELAKN VIEIEQQAIA ELVQFIDDNF ELACQLMFHC KGRVIVIGMG KSGHIGGKIA
ATLASTGTPS FFVHPGEASH GDLGMVTSND VVLTISNSGE TSEVLAIIPV IKRIGAKLIS
MTGNTESTLA KLADTHVCIK VSAEACPLGL TPTSSTTATL VMGDALAVAL LNARDFTAED
FALSHPGGSL GKRLLLRLSD IMHKDDRVPM ISENALIKDA LVEMSLKGLG MTAIVNEQQQ
LVGLFTDGDL RRVLDNRIDI HSESINTVMT HNPSVAQSDM LAAQALKIME DKKINGLIIV
DSNNIPVGAM NMHDFLSSGV L
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