| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4520 |
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| Symbol | rluA |
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| ID | 3518755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4771656 |
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| End bp | 4772339 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286960 |
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| Product | ribosomal large subunit pseudouridine synthase A |
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| Protein accession | YP_271168 |
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| Protein GI | 71278616 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGCAA ACCCTGATTT TATTTATCTC CCCCCTATGT CACCTTACCT TGATATTATT
TACCAAGATG ACGATATTGT TGTCTTAAAC AAAGCAAGTG GTATTTTAAG CGTGCCAGGT
CGCTTACCTG AACATCAAGA TTGTTTACAA AATCGTGTAC AACGAGTGTT ACCTACCGCA
ACTATCGTGC ATAGGTTAGA TATGGCCACA TCAGGCATAA TGATTATGGC GTTGAACAAA
CCAGCACATG TTGCTATTAG CCGTCAATTT GAGCAAAGAA AAACTCAAAA AAGCTACCTT
GCCCGAGTCT GGGGTTTAGT CGAACTAAAT GAAGGCAGTG TTGATTTACC ATTAATATCA
GACTGGCCCA ATCGACCAAA GCAAAAAGTT GATCATGAGA ACGGCAAAAA ATCATTAACA
CATTATCGGG TACTTAGTCA TAATGATTCA ATAGATGAAC AAGCTAACAC CTTGCTTGAA
CTAACACCTA TTACCGGGCG TTCTCATCAA CTTAGAGTCC ATATGTTAGC TTTAGGTCAT
CCCATTTTAG GGGATAGGCT TTATGCGCCT GAAGAAGCAT TAACGATGAG AAACAGATTA
CAATTACATG CGTTGAAATT AAGCTTATTC CATCCAAGAA CTGAACAAGC GATTACTTTT
GATGCGCCGT GCCCTTTCAT TTAA
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| Protein sequence | MSANPDFIYL PPMSPYLDII YQDDDIVVLN KASGILSVPG RLPEHQDCLQ NRVQRVLPTA
TIVHRLDMAT SGIMIMALNK PAHVAISRQF EQRKTQKSYL ARVWGLVELN EGSVDLPLIS
DWPNRPKQKV DHENGKKSLT HYRVLSHNDS IDEQANTLLE LTPITGRSHQ LRVHMLALGH
PILGDRLYAP EEALTMRNRL QLHALKLSLF HPRTEQAITF DAPCPFI
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