| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4457 |
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| Symbol | lpxC |
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| ID | 3519253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4695110 |
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| End bp | 4696027 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637286897 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_271105 |
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| Protein GI | 71279246 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0324546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAAGC AACGTACATT AAAAACGAGT GTTTCAACAG TAGGTGTTGG TTTACATAAA
GGTGAAAAAG TGCAGGTTAC TCTCCGTCCT GCGCCAGCAA ACACCGGTAT TGTTTTCCGT
CGTGTTGATC TTGACCCTGT GGTTGATATC AAAGCGTCAC CAGAAGCTGT GGGCGAAACA
ACGTTATGTA CCTGTTTAGT TAATGAACAG CAAGTTAAGG TTTCAACAGT TGAGCATTTA
CTTTCAGCTG TTGCAGGTTT AGGCATCGAT AATTTAATTA TTGATGTGGA TTCAGCTGAA
ATTCCTATTA TGGATGGTAG TGCCTTACCT TTTGTTTACT TAATTCAATC GGTAGGTATT
GAGACATTAA ATGCGCCAAA ACGCTTTTTG CGTATTAAGA AACCTATTCG TGTTGAAGAA
GGCGATAAAT GGGCAGAGTT ATTGCCTTAT GAAGGTTTTA GGGTCAATTT TTCTATTGAA
TTTGAACACC CCGTTATTGA GAAAACTTGT CAAACCATGA GTATGGACTT TTCTAGTTGT
TCTTTTATTA AAGAAATTAG TCGTGCTAGA ACCTTTGGTT TTATGAAAGA CATTGAGTTC
TTACGCTCTC ATAATTTGGC GTTGGGTGGC AGTTTAGAAA ATGCCATAGT ACTTGATAAT
TATAGAATGC TTAATAAAAA TGAATTGCGT TATGATGATG AATTTGTAAA GCATAAAATA
CTTGATGCTA TTGGTGATCT TTATATGGGC AGTGCCAGTA TTTTGGGTGA ATTAAACGCT
TTTAAATCAG GCCATGGTTT AAATAACCTG TTGCTTAGAG AAGTCTTTAA ACGGACTGAT
TCCTGGGAAT GGGTAACCTA TGAAGGTGAT AAAACTTCAC CGATAGAATA TCAAGAAGTT
AACGCCACTG CATTTTAA
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| Protein sequence | MIKQRTLKTS VSTVGVGLHK GEKVQVTLRP APANTGIVFR RVDLDPVVDI KASPEAVGET
TLCTCLVNEQ QVKVSTVEHL LSAVAGLGID NLIIDVDSAE IPIMDGSALP FVYLIQSVGI
ETLNAPKRFL RIKKPIRVEE GDKWAELLPY EGFRVNFSIE FEHPVIEKTC QTMSMDFSSC
SFIKEISRAR TFGFMKDIEF LRSHNLALGG SLENAIVLDN YRMLNKNELR YDDEFVKHKI
LDAIGDLYMG SASILGELNA FKSGHGLNNL LLREVFKRTD SWEWVTYEGD KTSPIEYQEV
NATAF
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