Gene CPS_4446 details

Gene Information

• Locus tag: CPS_4446
• ID: 3520695
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 4682776
• End bp: 4683486
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637286886
• Product: hypothetical protein
• Protein accession: YP_271094
• Protein GI: 71280231
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1943] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.885807
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAGAT CACCTCGCTT AAATTTAAAA GACATTCCGC AACATGTGAT TCAACGTGGT 
AATAATCGCC AATCTTGCTT TTTTGAAAAC CAAAACTATC AAGTTTATCT TGATAAACTG 
CTTGAATATA GCCAAAAGCA TCAAGTTGAA ATTCATGCTT TTATTTTAAT GACAAACCAT 
GTGCATTTAT TGGTCACACC AAGAATTGAA AATGGCGTTA GCCTGATGAT GCAGTCACTG 
GGGCGTTATT ATGTAAGATA TATAAATCAA ACTTACCACC GAACAGGCAC TTTATGGGAA 
GGTAGATATA AGTCGAGCTT GGTTGATAGC GATAGTTATT TTTTAATAGT TACTCGGTAT 
ATTGAATTCA ACCCGGTACG TGCAGAAATG GTTGTTCGAC CTGAATTATA TCCTTGGTCA 
AGTTATCATC AGCATGCTTT AGGAAAAACA ATAAGCTTAC TCACGGAGCA TGATTGTTAT 
TTAAAGCTTG GTGACTCTGC CAGTAAACGG CAGCAATCGT ATCTTAAATT TTGTAAACGA 
TACTTGAGTG ATGATGAAGC GTCATTCATC AGAGCATCAG TGAATAAAGC TTGGATTTTA 
GGTGATGATA GATTTAAGCA GCAAATAGAG AGGCAACTTG GTGTGTCAGT TTCGCCCAAA 
GCAAGAGGTG GAGATAGAAA GTCAATTAAG TATCAGCAAA GCAAAGGTTA G 

 

Protein sequence

MARSPRLNLK DIPQHVIQRG NNRQSCFFEN QNYQVYLDKL LEYSQKHQVE IHAFILMTNH 
VHLLVTPRIE NGVSLMMQSL GRYYVRYINQ TYHRTGTLWE GRYKSSLVDS DSYFLIVTRY 
IEFNPVRAEM VVRPELYPWS SYHQHALGKT ISLLTEHDCY LKLGDSASKR QQSYLKFCKR 
YLSDDEASFI RASVNKAWIL GDDRFKQQIE RQLGVSVSPK ARGGDRKSIK YQQSKG