| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4444 |
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| Symbol | |
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| ID | 3520018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4681376 |
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| End bp | 4681858 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286884 |
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| Product | type IV pilin |
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| Protein accession | YP_271092 |
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| Protein GI | 71279559 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACT TACAAAATAT GAAAAAAAGT GTACAAAAAG GTTTTACGTT AATTGAATTA
ATGATCGTTG TCGCGATTAT CGGTATTTTA GCAGCCGTGG CGTTACCTGC TTACAAAACT
TATGCGGATA AAGCTAAGTT TACTGAAGTA GTATTATCTG CAACTGCAGC AAAAACAGCA
GTTGATCTTT GTATTCAAAC AGGTAAGGGC GGTTTAGTAT CGAGTACTAC TCCTGCTACT
ATGCTTCTTG AGGCAGCTAA GTGTGAGACT ATACCTGACG TTACTGGTTG GTCTCAATCT
GGCATGGTAA CATCAGTTAA AATTTCCGGT ACCACTCTTG TCGGTCCTTA CTTAGTTACT
GTGATTCCAG CAGTACAAGG TAGCTTCGAT GCTACCCACA CGTATGTATT GACCGCAACA
GTTGGCAATG GTACAGCTGT TTGGAATCAT AGTGGTGGTT GTGTAGCTGC AGGATATTGT
TAA
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| Protein sequence | MKNLQNMKKS VQKGFTLIEL MIVVAIIGIL AAVALPAYKT YADKAKFTEV VLSATAAKTA
VDLCIQTGKG GLVSSTTPAT MLLEAAKCET IPDVTGWSQS GMVTSVKISG TTLVGPYLVT
VIPAVQGSFD ATHTYVLTAT VGNGTAVWNH SGGCVAAGYC
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