Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4416 |
Symbol | |
ID | 3522095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4653428 |
End bp | 4654162 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637286857 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_271065 |
Protein GI | 71281623 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA TAGTTACCAT GTCAAACATC CACAAACGTT ACGATGGTCA GCAAATAGAA ACCCATGCTT TACAAGGCGT TAGTTTAGAA ATAAATCAAG GGGAGTTTGT TGCAATTACC GGTCCTTCTG GTTGCGGTAA ATCGACATTG CTTTCTATTA TGGGTTTAAT GGACTCAGCT ACAGAGGGGA CATATCAACT CGCCAATATT TCGACTGCAG GCTTAAAAGT GGACCAACGC ACGCAAATTC GCAATGAGCA TATTGGTTAT GTTTTTCAAT CATTTAACTT AATAGATAAC TTGACTGTAT TTGAAAATGT CGCCTTGCCA CTTGAACACA GAGGTTGTTC TAAAAGTGAG ATAAAAACCC GCGTTGAGAA AGTATTGACG CAAGTTGATA TGTTACATCG CCAACATTAT CGTCCAAACC AATTATCTGG CGGTCAACAA CAACGTATTG CTATTGCACG TGCCCTTGTT GGTAAACCTG ACCTGATTTT AGTTGATGAG CCAACGGGTA ACTTAGACAG TAAGAATGGT GACCAAGTGA TGTCACTATT AGAACAACTT AATAAAGATG GATCCACCAT AGTCATGGTA ACCCATGACA GTCGCTATTC ACGTTGTGCT AGTCGCCAAA TTCAACTGCT CGATGGTCAG ATTGTTTCAG AGATTAATGC AGGACTAAGT CCACACGTTG AAAACAATGA AAAGTCATTA CAGGGGGTTG CATGA
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Protein sequence | MKNIVTMSNI HKRYDGQQIE THALQGVSLE INQGEFVAIT GPSGCGKSTL LSIMGLMDSA TEGTYQLANI STAGLKVDQR TQIRNEHIGY VFQSFNLIDN LTVFENVALP LEHRGCSKSE IKTRVEKVLT QVDMLHRQHY RPNQLSGGQQ QRIAIARALV GKPDLILVDE PTGNLDSKNG DQVMSLLEQL NKDGSTIVMV THDSRYSRCA SRQIQLLDGQ IVSEINAGLS PHVENNEKSL QGVA
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