| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4404 |
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| Symbol | lig |
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| ID | 3522597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4638011 |
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| End bp | 4638889 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286845 |
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| Product | DNA ligase |
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| Protein accession | YP_271053 |
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| Protein GI | 71282124 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGT ATGTTCTACG GATTTTCTTT GCCTTTATTT TATCAGTCCA TTTGTCTTCA
ACTGCACAAC AAACAACTCA AAAAACTCAA AAATTTAAGC CTAATATTCA GCATGGCGTG
AGCTACCAAA AGGTCGATGA CATTAGCCAG TATTATGTCT CTGAAAAACT GGATGGTATT
CGTGGTTACT GGGATGGAAA ACAATTGTTT ACTCGCCGAG GAAATTTAAT CAATAGTCCT
AGCTGGTTTA CTCAGCATTG GCCTACATAT CCAATGGACG GTGAACTCTG GCTTGCTAGA
GGGCAATTCC AACTATTACT TTCTTGTGCA ACTAAACGCA TAGCAGTCGA AAATAAAACG
ACTAGTTGCT GGAGAAGTGT TCGCTTTATG ATATTTGATC TTCCTAAACA TCTAGGGGAT
TTCAATGAAC GAGTAATTAA GATGCGGACT TTACTTGTAC AAAATCAATC GGTTTACTTA
GCCATGATAG ATCAGGTAAA ACTGGAGGAA TTAAGTGCGC TTGATCACAA ACTTGATGAA
GTCATCGCAA CTCACGGTGA GGGCCTTATG CTACACCTCG CTAGCGCTCA CTATCAACAA
GGCCGAAATC CCGCATTGAT GAAGCTAAAG AAATATCAAG ATGCCGAAGC AACAGTCATT
GGTTATACCG AAGGAAAAGG TAAATATCAG AACCAACTTG GCGCAATCAA AGTAAAAACA
AGTGATGGAA TAATTTTCAA AATTGGATCA GGTTTAAGTG ATATTCAGCG TGCCAACCCA
CCAAAAATTG GCACTATTAT TACCTTCAAG TACAACGGGC TCACACAAGC GGGTATACCA
AGGTTTGCCC GTTTTTGGCG TATAAAAGCT AGCGGTTAA
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| Protein sequence | MNKYVLRIFF AFILSVHLSS TAQQTTQKTQ KFKPNIQHGV SYQKVDDISQ YYVSEKLDGI
RGYWDGKQLF TRRGNLINSP SWFTQHWPTY PMDGELWLAR GQFQLLLSCA TKRIAVENKT
TSCWRSVRFM IFDLPKHLGD FNERVIKMRT LLVQNQSVYL AMIDQVKLEE LSALDHKLDE
VIATHGEGLM LHLASAHYQQ GRNPALMKLK KYQDAEATVI GYTEGKGKYQ NQLGAIKVKT
SDGIIFKIGS GLSDIQRANP PKIGTIITFK YNGLTQAGIP RFARFWRIKA SG
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