Gene CPS_4393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4393 
Symbol 
ID3518932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4628591 
End bp4629370 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content36% 
IMG OID637286834 
Producthypothetical protein 
Protein accessionYP_271042 
Protein GI71278442 
COG category[S] Function unknown 
COG ID[COG2861] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.355053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTAAATA CTTTTTTAAA AATTATCTCT ATACGTTCTT TTATAATACT TTATCTAATG 
CTTTTTAGTG TTCAAAGCAT TGCTCAAGCG AACCAAGTTG CTATCGTCAT TGATGATATG
GGGTATCGGT ATACCGACAA ACATGCGTTA ACTTTACCTG GAGCAATTAC CTATGCTTTT
CTACCTCATA CCACCTATGG TAAAAAACTT GCCATGCAAG CCAATAGCAC TAATCATGAT
GTGCTGATTC ACATACCAAT GGAATCTGAA AATAGAAAAA AATTAGGTCC TGGTGCGCTA
ACAAGTAATA TGGATGAACA AGCATTTAGT CAAAGCTTAA CTAAGTCCTT CGCTGAAATT
CCCTTTGCGA TTGGTATTAA TAATCATATG GGGAGCTATC TCACACAATT ATATCAACCT
ATGGCTTGGA CTATGACGTT TTTAAAACAG CATGATTTGT TTTTTTTAGA CAGTAAAACC
AGTCCTCATT CACAAGCACA ACAAGCTGCT ATCGATTTTG GCGTACCGGT TAAAGCAAGG
CATATATTTT TAGATAATGA ATTAACTGAA AAGTATATTA GTCAGCAATT TAAGCAACTC
ATTCATTTCG CTCAAAAACA CCAAACAGCT ATTGCTATCG CCCATCCTCA TCCCGAAACT
GTGGCAACAT TAAATAAACT CATTCCTACC TTAAAGTTAC ACGGTATTGA GTTAGTTCCA
TTATCTCGTT TATACCCAAC ATCGATCAAT AAGGTAATTA ACTCTACAGC AACTGAGTAA
 
Protein sequence
MLNTFLKIIS IRSFIILYLM LFSVQSIAQA NQVAIVIDDM GYRYTDKHAL TLPGAITYAF 
LPHTTYGKKL AMQANSTNHD VLIHIPMESE NRKKLGPGAL TSNMDEQAFS QSLTKSFAEI
PFAIGINNHM GSYLTQLYQP MAWTMTFLKQ HDLFFLDSKT SPHSQAQQAA IDFGVPVKAR
HIFLDNELTE KYISQQFKQL IHFAQKHQTA IAIAHPHPET VATLNKLIPT LKLHGIELVP
LSRLYPTSIN KVINSTATE