Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4369 |
Symbol | hslV |
ID | 3520045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4600735 |
End bp | 4601253 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637286810 |
Product | ATP-dependent protease peptidase subunit |
Protein accession | YP_271018 |
Protein GI | 71279586 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTACTA TCGTTTCAGT TAGACGTAAT GGCAAAGTGG CAATTGGTGG TGATGGTCAA GTATCACTTG GCAATACGGT AATGAAGGGA AATGCTCGTA AAGTACGTCG TTTATATAAT GGCAAAGTAC TCGCTGGTTT TGCCGGTGGT ACAGCCGATG CTTTTACATT ATTTGAGCGT TTTGAAAGTA AGCTTGAACA ACATCAAGGT CATTTAACCA AAGCCGCTGT CGAGCTTGCT AAAGATTGGC GAAGCGACCG AGCGTTAAGA AAACTTGAAG CCTTACTTGC TGTCGCTGAT GAAACAGCAT CATTGATCAT TACCGGTAAC GGCGATGTAA TTCAGCCTGA GCATGATCTT ATCGCTATAG GTAGTGGCGG TAATTTTGCG CAATCAGCCG CAACAGCTCT CTTAGAAAAT ACCGACTTAA GTGCCAAAGA AATAGTAGAA AAATCACTTA CTATTGCTGG TAATATCTGT GTATTTACCA ACCAAGAACA AACTATAGAC GAACTATAG
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Protein sequence | MTTIVSVRRN GKVAIGGDGQ VSLGNTVMKG NARKVRRLYN GKVLAGFAGG TADAFTLFER FESKLEQHQG HLTKAAVELA KDWRSDRALR KLEALLAVAD ETASLIITGN GDVIQPEHDL IAIGSGGNFA QSAATALLEN TDLSAKEIVE KSLTIAGNIC VFTNQEQTID EL
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