| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4301 |
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| Symbol | |
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| ID | 3521457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4528203 |
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| End bp | 4530512 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286742 |
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| Product | penicillin-binding protein |
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| Protein accession | YP_270951 |
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| Protein GI | 71280988 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.33062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAATAA ATAAAGCAAC AAAACGCAGC AGCCCTGTGG TCAAAGAAAA ATCAGTAATG
CGCCGAATAG GTATAACTTT AGGCAAGTTG ATGATTGCCA CTGTGTTTAC GGTAGGAATT
TTTTCTATTT ATCTTGATGC TAAGGTAAGG AAAAAGTTTG AAGGTCAGCG TTGGCAAGTA
CCTGTACAAG TTTATGGTCA AATAAAAAAA TTGCAGCTAG GTGAACAGGA AAACCTAGAA
GAAATAGCAC AGTCACTAAA AATTAATGGT TATCAGAAAG TTAAATTTGC CACCCGAGCA
GGCCAATTTT CTCAGTCGGC AGAACGTTTG AATATTTTTC AACGTGCTTT TGACTTTGCT
AATGGTGCCA ATTACGCACA ACAACTCAGC ATTGAAGTCG TTAGCGAAAT TGTTGTCTCC
CTGAGTGTTG ATGAGCAAGC TGTTTCTACT TTAATACTTG AACCACAATT ACTTGCGCGT
TTAGTTCCTG ATAATAAGGA AGATCGTGTA CTGGTGTCGT TAGAAGAACT ACCTAGTCAA
TTGATTGATA CATTATTGTT AATTGAAGAT CGTGATTTTT ATCATCATCA TGGCGTTTCT
CCCGTTGGTA TCTTTAGAGC ACTACTTAAT AATATTCGCG CTGGACGTAC GGTGCAAGGC
GGTAGTACCT TAACTCAACA ACTCGCAAAG AATATGTTTC TAAGTCGCGA ACGCACGCTG
TCTCGAAAGA TTAAAGAAGC ACTAATGGCG GTGATCCTAG AGCTTAGATA CAGTAAAGAT
CAACTGCTAG AAGCTTACAT TAATGAAGTC TATTTAGGGC AGAATTATGC TAATGGCGTT
TATGGTTTTG GCTTAGCCGC ACAGTTTTAT TTTGGTAAAA AAATTAATGA ATTAAGTCAT
GCCCAAATGG CTTTATTGAT AGCTCAAGTT AAAGGACCAA GTTACTACGA CCCATGGCGT
CATCCAGAAC GTGCGACAGA GCGCCGAGAC CTTATTCTTA GGCTTATGTT TGAACAACAC
TTATTACCAC TTGTTGATTT TGAACAGGCA GCAGAATCAA CACTATCTAT TAGGTCTAAT
CGACGATTAG CCAAAAAAAA TTACCCGGCT TATTTACAAC TAGTTAATGC AGAATTAAAT
CAACACCTGT CGAGTTTTAC TCAAAAGTCA GGTATTAAAG TATTTACCGG ATTTTCACAC
AGAAGCCAGC AATTATTAGA GCAAAGTGTT GCCAAGCAAT TACCTTTACT AGAACGGAAA
TACCACCAAA AGAATCTAGA AGCGGCGATG GTGGTTACTG ATATTGCTAG TGGTGAAATT
AGGGCGCTCG TTGGTGGTCG GGAAAGTGGA TATGCCGGCT TTAATCGAGC ACTTAATGCT
AAGCGTCATA TTGGTTCATT AATTAAACCA GCCATTTATG TTGCGGCACT TGAGCGTTAT
CAGCAATATA ATTTTGCTAC TATTTTAGAT GATAAGGCGA TTACCTTAAG AAATGGTACC
GGTAAAAAGT GGCAACCAAA AAACTATGAT GGGAAATATC GAGGGCAGGT TTCGTTAATT
GAAGGGTTAG TCTTTTCACT CAATGTACCC ACTATTAATT TGGGTATGAG TTTAGGTTTG
GATAGCGTAG CCGATGCTAT TAAAGCGTTG GGCTATCAGC AGAAACTTAA AATGCGTCCT
TCTGTTTTAT TGGGTGCAGT GAATATGTCG CCATTGGAAA TCAACCAATT ATATTTAGCG
ATTGCTAATA ATGGTTATTA CCAAAAGACC CATACCATCA CCAAAATACT CTCATCAAAT
AACGAGACGC TCTGGCAAAA GCAGCAATCA AGCGAGCAAC GTTTATCAAG TAATGCGGCC
TATTTACTTG ATTACGCTTT AGAAAGAGTC ACTCAAGTGG GCACAGCTAG ATCACTTACT
TGGCGTTTAA ATAACAAAAA AGTCGCGGGT AAAACAGGTA CAAGTAACGC CTTACGAGAT
AGTTGGTTCA TCGGTTATGA CAGCAAGCAT TTAATAACAA CCTGGTTGGG TAAAGATAAT
AATAAACCAA CGGGTTTGAC GGGGAGTAGT GGAGCGTTAC CTTTGTTCGC TGACTTCATA
AATAAACAGG GCGTAATAAA TAAAGTTGAA GCTAAACCAG AAAGTATTGT GGTCACTCTT
TTTGAGCAGC AAACGGGTAA TGCAGTCACA GATAAATGCG CCAATACGGT GATCTATCCT
GCGGTGCGAG ACGGCATTGT AACTTCAAAG GACTGTTTAC AAGAAAAAGA GGATCATAGG
TCTTGGTTTG AAAGGGTTTT TGGCGAGTAG
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| Protein sequence | MSINKATKRS SPVVKEKSVM RRIGITLGKL MIATVFTVGI FSIYLDAKVR KKFEGQRWQV
PVQVYGQIKK LQLGEQENLE EIAQSLKING YQKVKFATRA GQFSQSAERL NIFQRAFDFA
NGANYAQQLS IEVVSEIVVS LSVDEQAVST LILEPQLLAR LVPDNKEDRV LVSLEELPSQ
LIDTLLLIED RDFYHHHGVS PVGIFRALLN NIRAGRTVQG GSTLTQQLAK NMFLSRERTL
SRKIKEALMA VILELRYSKD QLLEAYINEV YLGQNYANGV YGFGLAAQFY FGKKINELSH
AQMALLIAQV KGPSYYDPWR HPERATERRD LILRLMFEQH LLPLVDFEQA AESTLSIRSN
RRLAKKNYPA YLQLVNAELN QHLSSFTQKS GIKVFTGFSH RSQQLLEQSV AKQLPLLERK
YHQKNLEAAM VVTDIASGEI RALVGGRESG YAGFNRALNA KRHIGSLIKP AIYVAALERY
QQYNFATILD DKAITLRNGT GKKWQPKNYD GKYRGQVSLI EGLVFSLNVP TINLGMSLGL
DSVADAIKAL GYQQKLKMRP SVLLGAVNMS PLEINQLYLA IANNGYYQKT HTITKILSSN
NETLWQKQQS SEQRLSSNAA YLLDYALERV TQVGTARSLT WRLNNKKVAG KTGTSNALRD
SWFIGYDSKH LITTWLGKDN NKPTGLTGSS GALPLFADFI NKQGVINKVE AKPESIVVTL
FEQQTGNAVT DKCANTVIYP AVRDGIVTSK DCLQEKEDHR SWFERVFGE
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