| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4291 |
|---|
| Symbol | thrA |
|---|
| ID | 3522081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 4520749 |
|---|
| End bp | 4523226 |
|---|
| Gene Length | 2478 bp |
|---|
| Protein Length | 825 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637286732 |
|---|
| Product | bifunctional aspartokinase I/homeserine dehydrogenase I |
|---|
| Protein accession | YP_270941 |
|---|
| Protein GI | 71281609 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases |
|---|
| TIGRFAM ID | [TIGR00657] aspartate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTAC TTAAATTTGG TGGCTCTTCA CTAGCTTCAG CAGAGCGTTT TCGTCAAGTT
GCCGATATTA TCCATGATAA AAGCAAATCA TCAAAACTTG CCGTTGTTGT ATCGGCCCCA
CAAGGGGTTA CCAACCACTT AGTTGCTATG ACTGAAAATA TTAGCGATGA AGAAAAAGTA
GTGGCAGATT TAGGTCACTT CAAACGTGCA ATTACTACTA TTATTGATGA TTTATCGGCA
AGTATAAGCA ACTTTAACAA TCAACATTGT GAGCAAGCGT TAGCGAATTA TGAACATCAA
ATTTCACGCT ATATGCAAGG TGCAATGTTA CTAACCTATT GCCCAGATCA TATCCGTGCC
CGTATTATCA GTACTGGTGA ACGTTTAAGT GTGGCAATAC TTGATGCCGT GTTACAAGCT
TATAGCGTAC AAGTATCACT GTTAGCACCA GAAAAGTTTT TGTATACCAA CAAGTCATCT
TTAAATGCAG TAGCAGATTT AGTGTTGTCG AAAGAAAAAT TTGAGCATGA ATACACTGAA
TTAAATCAAG TATCGTTAAT GCCAGGCTTT ATTGGGGTGA ATGCGGACAA CAATGATGGT
ACGCCAGAAG TAACTACATT AGGGCGTAAT GGCTCTGATT ATTCGGCAGC GGTATTAGCT
GTTTGTGCTG TCGCTGAGTG TTGTGAGATT TGGACGGATG TAGATGGAGT CTATAACGCA
GATCCGCGTT ACATTAAAGA AGCTAAATTA CTCGATTATT TATCGTATCA AGAAGCAATG
GAGCTCTCTT ATTTTGGCGC CAGTGTTTTA CACCCAAAAA CAATTGGACC AATTGCTCAG
TATCATATCC CTTGTTTAAT TAAGAATACC AGTAACCCAA GTGCACCAGG TACCTTAATT
TCCAATGAGA ATGACCAACA AAAACGCGTT AAAGCAATTT CTAACCTTGA TGACTTAACC
ATGGTAAACG TGTCAGGACC TGGCATGAAA GGCATGGTAG GCATGGCGAG CCGTGTATTC
GCAACTATGA GCAGAGAAAA TATTTCTTTG GTGCTTATTA GTCAATCATC TAGTGAGTAT
TGCATTAGCT TCTGTATTTA TTCAAGTGAC TCTGCGCGTG CTAAACAAAG CTTACACGAA
GAGTTTGAAT TAGAGCTGTT AAATGGCCTA CTTGAACCGT TAGCGCTAAA AGGTGAACTA
TCAATTGTGT CACTTGTTGG TGATGGTATG CACCATCAAC GAGGCGTGGC AGCTAAATTC
TTTAGTTCAT TAGCACAAGC ACGAGTTAAT GTGGTTGCTA TTGCTCAAGA TTCATCGGAG
CGCAGTATCT CAGTTGTTGT GGAACAACGA AAATGTATGG ATGCGATGAA AGTAAGTCAC
CAGAACTTCT TTTCTCATAA ACCAACGATT GATGTTTTCT TAGTCGGCTG TGGTGTTGTT
GGCAGTGAGC TAATAGCGCA AATATCTCGT CAACAAGCGA GTTTGAAAAA GCAAAACATT
GTCTTGAAAG TTTACGGTAT TGCTAACTCG AAAGGCATGG TATTTGATAA AGAAGGTATC
GACTTAAATA ACTGGCAAGA TGCTATGGCG AATGCAACTG AAGCGCTAGC AGTTAATGTA
GATAATCTTA AAGGTTTTGT TCGTGATAAC CATCTAATCA ACCCTGTTTT TGTTGACTCA
ACGTCAAATG AAACATTAGC AATGAGTTAT GTAGATTACC TTGCTGAAGG TTTTCATATT
GTTACGCCAA ATAAAAAAGC AAATACTGAC TCTTGGGAAT ATTATCAAGA GTTACGTAGT
ACTGCACAAA AAACCAATCG TCGTTTCTTA TATGAAACAA CGGTCGGTGC TGGTTTACCT
GTTATTGATA CCCTACAAAG CTTAATTAAA GCGGGCGATG AGTTACAGCG TTTCGAAGGT
GTCTTGTCGG GTTCGTTATC TTATATGTTT GGTAAATTAG AAGAGGGTAT GTCGTTATCA
GAGGCGACTG CAATTGCTAA AGAAAATGGT TTCACTGAAC CAGACCCTCG TGATGACTTA
AGTGGTATGG ACGTTGCGCG TAAATTATTA ATTATGGCTC GTGAAGCTGG CATGCAGTTA
GAGTTATCAG ATATCAATAT TGAGTCAGTA TTACCCGACG ATTTTGATGC CAGCGGTGAT
GTTAGTCAGT TTATGAGTAA CTTAACTAAG CTTGATGGTG ACTTTGCAGA GCGCGTAGCG
AGTGCAAAAT TAGAAGGTAA AGTACTTCGT TATATTGGTA ATATTGTTGA TGGTAATTGC
CAAGTTTCTA TAGAGTCTGT AGGAATTAAC CACCCGTTAT ATAGCATTAA AGATGGCGAA
AACGCCTTGG CTATTCATAG TCGTTATTAC CAGCCTTTAC CGTTTGTTTT ACGCGGTTAC
GGTGCGGGCG CAGCGGTTAC AGCTGCAGGT GTTTTTGGTG ATTTATTAAG AACCTTAGCA
TGGGAGCAAC AGCACTAA
|
|---|
| Protein sequence | MRVLKFGGSS LASAERFRQV ADIIHDKSKS SKLAVVVSAP QGVTNHLVAM TENISDEEKV
VADLGHFKRA ITTIIDDLSA SISNFNNQHC EQALANYEHQ ISRYMQGAML LTYCPDHIRA
RIISTGERLS VAILDAVLQA YSVQVSLLAP EKFLYTNKSS LNAVADLVLS KEKFEHEYTE
LNQVSLMPGF IGVNADNNDG TPEVTTLGRN GSDYSAAVLA VCAVAECCEI WTDVDGVYNA
DPRYIKEAKL LDYLSYQEAM ELSYFGASVL HPKTIGPIAQ YHIPCLIKNT SNPSAPGTLI
SNENDQQKRV KAISNLDDLT MVNVSGPGMK GMVGMASRVF ATMSRENISL VLISQSSSEY
CISFCIYSSD SARAKQSLHE EFELELLNGL LEPLALKGEL SIVSLVGDGM HHQRGVAAKF
FSSLAQARVN VVAIAQDSSE RSISVVVEQR KCMDAMKVSH QNFFSHKPTI DVFLVGCGVV
GSELIAQISR QQASLKKQNI VLKVYGIANS KGMVFDKEGI DLNNWQDAMA NATEALAVNV
DNLKGFVRDN HLINPVFVDS TSNETLAMSY VDYLAEGFHI VTPNKKANTD SWEYYQELRS
TAQKTNRRFL YETTVGAGLP VIDTLQSLIK AGDELQRFEG VLSGSLSYMF GKLEEGMSLS
EATAIAKENG FTEPDPRDDL SGMDVARKLL IMAREAGMQL ELSDINIESV LPDDFDASGD
VSQFMSNLTK LDGDFAERVA SAKLEGKVLR YIGNIVDGNC QVSIESVGIN HPLYSIKDGE
NALAIHSRYY QPLPFVLRGY GAGAAVTAAG VFGDLLRTLA WEQQH
|
|---|
| |