Gene CPS_4290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4290 
SymbolthrB 
ID3521131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4519763 
End bp4520749 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content39% 
IMG OID637286731 
Producthomoserine kinase 
Protein accessionYP_270940 
Protein GI71280663 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0083] Homoserine kinase 
TIGRFAM ID[TIGR00191] homoserine kinase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTTA GTAATACCAA TGTTAATAAA AGTGTTTCGG TATTTGCACC GGCCTCTATA 
GGTAATGTTA GTGTAGGCTT TGATGTTTTA GGGCTGGCAG TAAAGCCGGT AGATGGTACA
TTATTAGGCG ATGTGGTCAC TGTAAATGCA ACAACTAGCA ATGACAATAG CCTAACAGTT
ATCGGTAACT TTGCTGATAA GTTACCAAGT AATAAGGAAG ACAATATTGT TTGGTCTTGC
CTATTATTGT TTAATGAGCA ATTAATCAGT GTGAAACAAA CACCTGTTTT TGTTGCCATT
ACTTTAGATA AAAAAATGCC TGTTGGCAGC GGTTTAGGAT CAAGTGCCTG TTCTGTTGTC
GCAGCACTAG CCTCCTTGAA TGCGTTTTAT GCTAAATACC ATAATTTTAG CTTTTCTGAA
AATGTCGTAT TAAAAATGAC AGGCCAAATG GAAGCACAAA TTAGTGGCAG CTTACATTAT
GATAATGTTG CGCCATGTTA TTTAGGTGGT TTGCAATTAA TGGTTCCGGA TGAAAATGTG
ATCTCGCGCA TTTTACCTAG TTTCGATGAT TGCTATTATG TAATGGCGTA TCCTGGTATT
GAGGTATCAA CTAAAGCAGC CAGAGAGGTT CTACCTACAA CTTATAGTCG TAGCGACGTT
ATCAGCTATG GTCAAAACTT AGCGACATTT GTTGATGCAT GTCATCGCCA AGATAAAAGC
CAAGCATTCT CAGTACTAAC CGATGTGATT GCAGAACCAT ATCGCACAGA TTTGTTACCA
AAATATAAAG CCTCTCGAGA TTATTTAAGC TCGCAAGGGG CGTTAGCCGT TGGAATTTCA
GGCTCAGGGC CGACACTATT TTGTGTTTGT GATAGCGAAA AACAAGCAGA GCAATTTGCC
TTATGGTTAC AAGAGAACTA TTTACAAACA GCATTAGGCT TTGTCCATGT GTGTAAAGTC
GATGATGTTG GCGCAACAGA AATTTAA
 
Protein sequence
MSVSNTNVNK SVSVFAPASI GNVSVGFDVL GLAVKPVDGT LLGDVVTVNA TTSNDNSLTV 
IGNFADKLPS NKEDNIVWSC LLLFNEQLIS VKQTPVFVAI TLDKKMPVGS GLGSSACSVV
AALASLNAFY AKYHNFSFSE NVVLKMTGQM EAQISGSLHY DNVAPCYLGG LQLMVPDENV
ISRILPSFDD CYYVMAYPGI EVSTKAAREV LPTTYSRSDV ISYGQNLATF VDACHRQDKS
QAFSVLTDVI AEPYRTDLLP KYKASRDYLS SQGALAVGIS GSGPTLFCVC DSEKQAEQFA
LWLQENYLQT ALGFVHVCKV DDVGATEI