Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4290 |
Symbol | thrB |
ID | 3521131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4519763 |
End bp | 4520749 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637286731 |
Product | homoserine kinase |
Protein accession | YP_270940 |
Protein GI | 71280663 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0083] Homoserine kinase |
TIGRFAM ID | [TIGR00191] homoserine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGTTA GTAATACCAA TGTTAATAAA AGTGTTTCGG TATTTGCACC GGCCTCTATA GGTAATGTTA GTGTAGGCTT TGATGTTTTA GGGCTGGCAG TAAAGCCGGT AGATGGTACA TTATTAGGCG ATGTGGTCAC TGTAAATGCA ACAACTAGCA ATGACAATAG CCTAACAGTT ATCGGTAACT TTGCTGATAA GTTACCAAGT AATAAGGAAG ACAATATTGT TTGGTCTTGC CTATTATTGT TTAATGAGCA ATTAATCAGT GTGAAACAAA CACCTGTTTT TGTTGCCATT ACTTTAGATA AAAAAATGCC TGTTGGCAGC GGTTTAGGAT CAAGTGCCTG TTCTGTTGTC GCAGCACTAG CCTCCTTGAA TGCGTTTTAT GCTAAATACC ATAATTTTAG CTTTTCTGAA AATGTCGTAT TAAAAATGAC AGGCCAAATG GAAGCACAAA TTAGTGGCAG CTTACATTAT GATAATGTTG CGCCATGTTA TTTAGGTGGT TTGCAATTAA TGGTTCCGGA TGAAAATGTG ATCTCGCGCA TTTTACCTAG TTTCGATGAT TGCTATTATG TAATGGCGTA TCCTGGTATT GAGGTATCAA CTAAAGCAGC CAGAGAGGTT CTACCTACAA CTTATAGTCG TAGCGACGTT ATCAGCTATG GTCAAAACTT AGCGACATTT GTTGATGCAT GTCATCGCCA AGATAAAAGC CAAGCATTCT CAGTACTAAC CGATGTGATT GCAGAACCAT ATCGCACAGA TTTGTTACCA AAATATAAAG CCTCTCGAGA TTATTTAAGC TCGCAAGGGG CGTTAGCCGT TGGAATTTCA GGCTCAGGGC CGACACTATT TTGTGTTTGT GATAGCGAAA AACAAGCAGA GCAATTTGCC TTATGGTTAC AAGAGAACTA TTTACAAACA GCATTAGGCT TTGTCCATGT GTGTAAAGTC GATGATGTTG GCGCAACAGA AATTTAA
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Protein sequence | MSVSNTNVNK SVSVFAPASI GNVSVGFDVL GLAVKPVDGT LLGDVVTVNA TTSNDNSLTV IGNFADKLPS NKEDNIVWSC LLLFNEQLIS VKQTPVFVAI TLDKKMPVGS GLGSSACSVV AALASLNAFY AKYHNFSFSE NVVLKMTGQM EAQISGSLHY DNVAPCYLGG LQLMVPDENV ISRILPSFDD CYYVMAYPGI EVSTKAAREV LPTTYSRSDV ISYGQNLATF VDACHRQDKS QAFSVLTDVI AEPYRTDLLP KYKASRDYLS SQGALAVGIS GSGPTLFCVC DSEKQAEQFA LWLQENYLQT ALGFVHVCKV DDVGATEI
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