Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4288 |
Symbol | ung |
ID | 3518570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4517517 |
End bp | 4518194 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637286729 |
Product | uracil-DNA glycosylase |
Protein accession | YP_270938 |
Protein GI | 71278897 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAAC CCCAATGGCA GCAGTTAATT GCTGGTGAAG CGAAGCAAAG CTACTTTAAA AACTTAGTCA AAGAAGTCGC AACGCAAAGA GCATCGGAGA TTTCAATTTA TCCAGCAGAA GGTGATGTGT TTAATGCTTT TAACCACGTT GATTTAGCAG AGATAAAAGT TGTCATTCTT GGGCAAGATC CTTATCACGG AAAAGATCAA GCACATGGTT TAGCTTTTTC AGTGCAGGAG GGCATCAAGG TACCGCCATC ACTTGTTAAT ATTTATAAAG AACTGGCGAC CGATGTTGAA GGCTTTGAAA TACCAAAGCA TGGCTGTTTA ACACATTGGG CAGAGCAAGG AGTACTGTTG TTAAATACGG TATTAACAGT GCAGCAAGCC AATGCGCATT CTCACGCTAA GCTGGGTTGG GAGACTTTTA CCGAGCAAGC TATTAACGCG TTAAATGAGC ACAATGATGG TTGTGTTTTT ATTTTATGGG GAGCACATGC ACATAAGAAA GGTAAAAATA TTAACCAAGA AAAACATTTA GTTTTAGCGG GTCCACATCC GTCGCCATTG TCTGCTTACA GAGGTTTTTT TGGCTGTAAA CATTTCTCTC AAGCTAATGC TTGGTTAGCT AAACACGAGG TTAATCAAGT TGATTGGCAT TTACCTTTGG AGGCTTAG
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Protein sequence | MIKPQWQQLI AGEAKQSYFK NLVKEVATQR ASEISIYPAE GDVFNAFNHV DLAEIKVVIL GQDPYHGKDQ AHGLAFSVQE GIKVPPSLVN IYKELATDVE GFEIPKHGCL THWAEQGVLL LNTVLTVQQA NAHSHAKLGW ETFTEQAINA LNEHNDGCVF ILWGAHAHKK GKNINQEKHL VLAGPHPSPL SAYRGFFGCK HFSQANAWLA KHEVNQVDWH LPLEA
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