Gene CPS_4288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4288 
Symbolung 
ID3518570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4517517 
End bp4518194 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content40% 
IMG OID637286729 
Producturacil-DNA glycosylase 
Protein accessionYP_270938 
Protein GI71278897 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAC CCCAATGGCA GCAGTTAATT GCTGGTGAAG CGAAGCAAAG CTACTTTAAA 
AACTTAGTCA AAGAAGTCGC AACGCAAAGA GCATCGGAGA TTTCAATTTA TCCAGCAGAA
GGTGATGTGT TTAATGCTTT TAACCACGTT GATTTAGCAG AGATAAAAGT TGTCATTCTT
GGGCAAGATC CTTATCACGG AAAAGATCAA GCACATGGTT TAGCTTTTTC AGTGCAGGAG
GGCATCAAGG TACCGCCATC ACTTGTTAAT ATTTATAAAG AACTGGCGAC CGATGTTGAA
GGCTTTGAAA TACCAAAGCA TGGCTGTTTA ACACATTGGG CAGAGCAAGG AGTACTGTTG
TTAAATACGG TATTAACAGT GCAGCAAGCC AATGCGCATT CTCACGCTAA GCTGGGTTGG
GAGACTTTTA CCGAGCAAGC TATTAACGCG TTAAATGAGC ACAATGATGG TTGTGTTTTT
ATTTTATGGG GAGCACATGC ACATAAGAAA GGTAAAAATA TTAACCAAGA AAAACATTTA
GTTTTAGCGG GTCCACATCC GTCGCCATTG TCTGCTTACA GAGGTTTTTT TGGCTGTAAA
CATTTCTCTC AAGCTAATGC TTGGTTAGCT AAACACGAGG TTAATCAAGT TGATTGGCAT
TTACCTTTGG AGGCTTAG
 
Protein sequence
MIKPQWQQLI AGEAKQSYFK NLVKEVATQR ASEISIYPAE GDVFNAFNHV DLAEIKVVIL 
GQDPYHGKDQ AHGLAFSVQE GIKVPPSLVN IYKELATDVE GFEIPKHGCL THWAEQGVLL
LNTVLTVQQA NAHSHAKLGW ETFTEQAINA LNEHNDGCVF ILWGAHAHKK GKNINQEKHL
VLAGPHPSPL SAYRGFFGCK HFSQANAWLA KHEVNQVDWH LPLEA