Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4255 |
Symbol | |
ID | 3518965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4484597 |
End bp | 4485757 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637286696 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_270905 |
Protein GI | 71278436 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATG TAAGCGGAAA AGTAAACCTA CTTAATTTTG ATCATAAAAG TATGCGTGAA TACTTAGAAT CTATTGGTGA AAAGCCTTTT AGAGCCGATC AAATCATGAA GTGGATTTAT CACTTTGGTT ACAGTGACTT TGAACAAATG ACCAATATCA ATAAGAAGTT ACGTGAGAAA CTACAGCGTA ACTGTATTAT ATCTGCACCA GATATTTCTG AAAAACAAGT GTCAGAAGAC GGTACTATTA AATACGCTTT GAAGCTTGAA GGCGGACAAG AAGTAGAAAC CGTTTGGATC CCTGAAAATG ATCGCGCAAC GCTATGTGTA TCATCTCAGG TTGGCTGTGC ATTAGAATGT ACCTTCTGTG CTACCGCTCA GCAAGGCTTC AATCGCAATT TATCTATGGC CGAAATTATT GGCCAAGTAT GGCGTGTCGC CAATGATATT GGTGCCACTC GTATCGCCGG TACTCGCCCG ATTACCAACA TTGTTATGAT GGGTATGGGT GAACCATTAT TAAATATGAA AAATTTAATA CCAGCGCTTG ATACTATGTT GAACGACTTA GGTTATGGTT TATCTAAGCG TCGCGTAACT GTGAGTACCT CAGGTGTTGT TCCTGCATTA GATATGCTTA AAGCAAAAAT CGATTGTGCC TTAGCTATTT CAATTCATGC ACCTAATAAT AAGTTGCGTG ATGAGTTAGT ACCAATTAAT AAAAAATACC CATTAGAAGA CTTCATTGCC GCAGCAGGTC GTTATATCGA AGGCTCAAAA GCGAACAAAC AAGCAACAAT TGAATACGTT ATGCTTGACC ACGTTAATGA CAGTACCGAC CAAGCCCATG AATTAGCGCA TGCATTGAAA GGGTTGCCAA GTAAGATTAA TTTAATACCT TTTAATCCTT ATCCTGGTTC ACCTTATTCA CGTTCAAGTA ACTCTCGCAT CGATCGCTTT GATAAAGTAT TACAAAGTTA TGGCCTAACT GTTATCACTA GGCGCACACG TGGAGAAGAT ATTGATGCAG CTTGTGGTCA GCTTGCAGGT GATGTTTTTG ATAGAACTAA GCGAAGTGTT ATAAATGCAG CCAAAAACGC TGAAATAAGT TCATTGAAAA ATCAACCTAA AGCTGACACT ATCTCTATAA AAGTAGTCTA A
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Protein sequence | MSDVSGKVNL LNFDHKSMRE YLESIGEKPF RADQIMKWIY HFGYSDFEQM TNINKKLREK LQRNCIISAP DISEKQVSED GTIKYALKLE GGQEVETVWI PENDRATLCV SSQVGCALEC TFCATAQQGF NRNLSMAEII GQVWRVANDI GATRIAGTRP ITNIVMMGMG EPLLNMKNLI PALDTMLNDL GYGLSKRRVT VSTSGVVPAL DMLKAKIDCA LAISIHAPNN KLRDELVPIN KKYPLEDFIA AAGRYIEGSK ANKQATIEYV MLDHVNDSTD QAHELAHALK GLPSKINLIP FNPYPGSPYS RSSNSRIDRF DKVLQSYGLT VITRRTRGED IDAACGQLAG DVFDRTKRSV INAAKNAEIS SLKNQPKADT ISIKVV
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