Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4209 |
Symbol | leuB |
ID | 3521518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4430113 |
End bp | 4431201 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637286650 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_270859 |
Protein GI | 71281049 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCAACA TAGCAATTCT AGCCGGTGAT GGTATCGGCC CAGAAGTCAT GGTTGAAGCT AAAAAAGTGT TAAACACGGT AGCGAGCAAG TTTGATTTTG AAATAACAAC TCAAGACTAT GATATTGGTG GTGCTGCCAT TGATAATCAC GGTAATGCTT TGCCTGATTC AACCATGGCT GGTTGTATAG AGAGCGATGC TATTTTATTT GGTAGCGTTG GTGGTCCTAA ATGGGCAAAT TTACCGCCAA CAGAGCAACC AGAACGCTGT GCCTTATTAG GTTTACGTAG CCACTTCGAT TTATTTTGCA ACATGCGCCC AGCAACATTA CAACCTGCGT TATCCTCGTT ATCTACTTTG CGTAGCGATA TTTCCGAGCA AGGTTTTGAT GTATTAGTGA TCCGTGAATT AACCGGTGAT ATCTATTTTG GCGAACCAAA AGGCCGTAGA GGTGAAGGCG AAGAAGAAAC AGGTTTTGAT TCTATGTTTT ATTCACGCCG TGAAGTTAAA CGTATCAGCC ACCTTGCTTT TCAAGCAGCG CAAAAGCGTA ATAACAAAGT GACTTCTGTT GATAAAGCCA ATGTATTAGC AACCAGTCAA TTATGGCGTC AAGTGGTTGA AGAAGTTGCA GTAGAGTATC CTGACGTTGA ATTAGAGCAC CTTTATGTTG ATAACGCTGC TATGCAGTTA GTTCGCGATC CTAACCAGTT TGATGTGATG CTTTGCCCTA ACTTGTTCGG TGATATTTTA TCTGATATTT GCGCCATGAT TACCGGCTCT ATGGGCCTGT TACCTTCAGC GAGCTTAAAC AGCGACGGTT TTGGTATGTA TGAGCCTGCT GGTGGCAGCG CACCAGACAT TGCAGGCCTT GGCGTAGCTA ACCCTATTGC TCAAATTCTA TCAGCGGCAT TAATGCTTCG TTATAGCTTA AATCAAGGTG CAGCAGCCAA AGCGATTGAA GATGCAGTAT CAAATGCACT TGATAATGGT GTGTTAACTG CTGATTTATT ACCAGCCAAC GAACGAAAAA ATGCTAAATC AACCAGTGAA GTGGGTGATT ATATTTGTAA ACAGATTGAG AGCGCATAA
|
Protein sequence | MSNIAILAGD GIGPEVMVEA KKVLNTVASK FDFEITTQDY DIGGAAIDNH GNALPDSTMA GCIESDAILF GSVGGPKWAN LPPTEQPERC ALLGLRSHFD LFCNMRPATL QPALSSLSTL RSDISEQGFD VLVIRELTGD IYFGEPKGRR GEGEEETGFD SMFYSRREVK RISHLAFQAA QKRNNKVTSV DKANVLATSQ LWRQVVEEVA VEYPDVELEH LYVDNAAMQL VRDPNQFDVM LCPNLFGDIL SDICAMITGS MGLLPSASLN SDGFGMYEPA GGSAPDIAGL GVANPIAQIL SAALMLRYSL NQGAAAKAIE DAVSNALDNG VLTADLLPAN ERKNAKSTSE VGDYICKQIE SA
|
| |