Gene CPS_4209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4209 
SymbolleuB 
ID3521518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4430113 
End bp4431201 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content43% 
IMG OID637286650 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_270859 
Protein GI71281049 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAACA TAGCAATTCT AGCCGGTGAT GGTATCGGCC CAGAAGTCAT GGTTGAAGCT 
AAAAAAGTGT TAAACACGGT AGCGAGCAAG TTTGATTTTG AAATAACAAC TCAAGACTAT
GATATTGGTG GTGCTGCCAT TGATAATCAC GGTAATGCTT TGCCTGATTC AACCATGGCT
GGTTGTATAG AGAGCGATGC TATTTTATTT GGTAGCGTTG GTGGTCCTAA ATGGGCAAAT
TTACCGCCAA CAGAGCAACC AGAACGCTGT GCCTTATTAG GTTTACGTAG CCACTTCGAT
TTATTTTGCA ACATGCGCCC AGCAACATTA CAACCTGCGT TATCCTCGTT ATCTACTTTG
CGTAGCGATA TTTCCGAGCA AGGTTTTGAT GTATTAGTGA TCCGTGAATT AACCGGTGAT
ATCTATTTTG GCGAACCAAA AGGCCGTAGA GGTGAAGGCG AAGAAGAAAC AGGTTTTGAT
TCTATGTTTT ATTCACGCCG TGAAGTTAAA CGTATCAGCC ACCTTGCTTT TCAAGCAGCG
CAAAAGCGTA ATAACAAAGT GACTTCTGTT GATAAAGCCA ATGTATTAGC AACCAGTCAA
TTATGGCGTC AAGTGGTTGA AGAAGTTGCA GTAGAGTATC CTGACGTTGA ATTAGAGCAC
CTTTATGTTG ATAACGCTGC TATGCAGTTA GTTCGCGATC CTAACCAGTT TGATGTGATG
CTTTGCCCTA ACTTGTTCGG TGATATTTTA TCTGATATTT GCGCCATGAT TACCGGCTCT
ATGGGCCTGT TACCTTCAGC GAGCTTAAAC AGCGACGGTT TTGGTATGTA TGAGCCTGCT
GGTGGCAGCG CACCAGACAT TGCAGGCCTT GGCGTAGCTA ACCCTATTGC TCAAATTCTA
TCAGCGGCAT TAATGCTTCG TTATAGCTTA AATCAAGGTG CAGCAGCCAA AGCGATTGAA
GATGCAGTAT CAAATGCACT TGATAATGGT GTGTTAACTG CTGATTTATT ACCAGCCAAC
GAACGAAAAA ATGCTAAATC AACCAGTGAA GTGGGTGATT ATATTTGTAA ACAGATTGAG
AGCGCATAA
 
Protein sequence
MSNIAILAGD GIGPEVMVEA KKVLNTVASK FDFEITTQDY DIGGAAIDNH GNALPDSTMA 
GCIESDAILF GSVGGPKWAN LPPTEQPERC ALLGLRSHFD LFCNMRPATL QPALSSLSTL
RSDISEQGFD VLVIRELTGD IYFGEPKGRR GEGEEETGFD SMFYSRREVK RISHLAFQAA
QKRNNKVTSV DKANVLATSQ LWRQVVEEVA VEYPDVELEH LYVDNAAMQL VRDPNQFDVM
LCPNLFGDIL SDICAMITGS MGLLPSASLN SDGFGMYEPA GGSAPDIAGL GVANPIAQIL
SAALMLRYSL NQGAAAKAIE DAVSNALDNG VLTADLLPAN ERKNAKSTSE VGDYICKQIE
SA