Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4208 |
Symbol | leuA |
ID | 3521353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4428459 |
End bp | 4430039 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637286649 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_270858 |
Protein GI | 71280884 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACC CACAAATTAA TAATGACCAA GTTATAATTT TTGACACTAC TTTACGTGAT GGTGAGCAAG CATTAAATGC CAGCTTATCG GTACATGAAA AACTTCAAAT TGCCTTAGCA ATTGAACGCT TAGGGGTAGA CGTAATGGAA GTCGGTTTTC CGGTTTCTTC TCCTGGCGAT TTTGAATCAG TACAGCAAAT TGCCCGCACA ATAAAAAATG CTCGTGTTTG TGGTTTAGCG CGCGCAGTAG AAGCAGATAT TGATGCCTGT GCAGAAGCGT TAAAAGTTGC GGACCAATTT CGTATCCATA CCTTTATTTC AACCTCTGAT GTGCACGTAC AGCAAAAACT AAAAAAAGAA TTTAGTGATG TAGAAGCAAT GGCAATTCAC GCGGTTAAGC ATGCAAGAAA GTACACTGAT GACGTCGAGT TCTCTTGTGA GGATGCAGGC CGTACGCCAA TTGATAATTT ATGTCGCATG GTAGAAGGTG CTATTAAAGC CGGCGCCACC ACAGTCAATA TTCCCGATAC AGTCGGCTAC ACCCTACCCT TCGAATTTCA AGGCATCATA ACTGACTTGT TTAATCGTGT ACCTAATATT GACCAAGCGA TAATCTCTGT CCATTGTCAT AATGACTTAG GTTTAGCTGT CGCTAACTCT ATGGCTGCAG TTCAAGCTGG AGCACGTCAA ATTGAATGTA CTATCAATGG TATTGGTGAA CGTGCGGGTA ACTGTTCGTT AGAAGAAGTC GCCATGATCA TGCAAACACG TCAAGCATTG TTAGGTGTAA AAACCAATAT CAATCACCAA GAAATAGCAC GTGTGTCTAA GTTAGTCAGC ACAGTATGTA ATATGCCTGT ACAATTAAAT AAAGCCATTG TTGGCGGTAA TGCGTTTAGC CATTCATCAG GTATTCATCA AGATGGCATG TTAAAAGCTA GTAATACGTA CGAGATCATG ACACCTGAAA GTGTCGGTAT CGCCAAAACT AAATTAAACC TAACCTCTCG CAGTGGCCGT CATGTCATAA AACACCGCAT GGAAAGTTTA GGTTACCAAG AAAGTGATTA TGAAATTGAA GAATTATATG CTGACTTTTT AACATTGGCA GATAAAAAAG GTCAAGTATT TGATGATGAC TTAGAGGCGT TAGTGTTTAA GTTACAGCAA AAAGATTTAC AAGATTTTTT CCAGTTAGAC ACGATTAATG TGCAATGTGG TGATGGCGAG TTTTCTACCG CTAGCATCAA GCTCATCTCT GGTGAAGTAA CAGGTGATAA AGAGAATAGC AAGACACATG CTGCTACAGG TAACGGTCCT GTTGATGCGC TGTATCAAGC AATTAAGCAA AGTGTTGATA TAGAATTTGA AGTCAGTGAT TACAAAATAT CTAATAAAGG CTCAGGTGAA GATGGTTTAG GCCAAGCCGA TTTAATAATC ATTTGGCAAG GTAGAAATTT CCACGGCTAT GGTTTAGAAA CTGATGTAAT TGAAGCATCA GGACAAGCAT TAATTAATGC ACTAAACAGC ATCCATAGAG CGATGACTAT TGCTGATTTG AAATCCGCAA AACAAGCTTA A
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Protein sequence | MSNPQINNDQ VIIFDTTLRD GEQALNASLS VHEKLQIALA IERLGVDVME VGFPVSSPGD FESVQQIART IKNARVCGLA RAVEADIDAC AEALKVADQF RIHTFISTSD VHVQQKLKKE FSDVEAMAIH AVKHARKYTD DVEFSCEDAG RTPIDNLCRM VEGAIKAGAT TVNIPDTVGY TLPFEFQGII TDLFNRVPNI DQAIISVHCH NDLGLAVANS MAAVQAGARQ IECTINGIGE RAGNCSLEEV AMIMQTRQAL LGVKTNINHQ EIARVSKLVS TVCNMPVQLN KAIVGGNAFS HSSGIHQDGM LKASNTYEIM TPESVGIAKT KLNLTSRSGR HVIKHRMESL GYQESDYEIE ELYADFLTLA DKKGQVFDDD LEALVFKLQQ KDLQDFFQLD TINVQCGDGE FSTASIKLIS GEVTGDKENS KTHAATGNGP VDALYQAIKQ SVDIEFEVSD YKISNKGSGE DGLGQADLII IWQGRNFHGY GLETDVIEAS GQALINALNS IHRAMTIADL KSAKQA
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