| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4195 |
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| Symbol | |
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| ID | 3522978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4415061 |
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| End bp | 4415972 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637286637 |
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| Product | LysM domain-containing protein |
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| Protein accession | YP_270846 |
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| Protein GI | 71282503 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.543729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAA ATAAAAGATC CCTTGTTACT TCGTTAAGCT TCTTTATCGC ACTGATATTT
ATTAAGCCTT CGACGGCAAC TGTGTATGAA ATAGAAAGTG AGAACAAGCG TCTAATAGGT
GAACCTATCA TTCATACTGT AGTTAAAGGA GACTACTTTC AGCAATTAGC TGAGCAATAT
GATGTTGGTT TTTTAGCATT ACTGGCGGCT AATCCCGAGC ATGACCCCTT TTTACTTAAA
GTTGATACCG AGGTGGTAAT ACCAAATCAA ATGTTATTAC CCTTTATTTC ACGAAAAGGA
ATAGTCATCA ATCTGCCTGA ATTACGCTTA TATTACTATT CACCCGAAGA AAATAAAGTC
CATGTTTTTC CTGTAGGTAT CGGTCGACAG GGCTTGTCTA CACCGTTAAC TAGCACTGTA
ATTGGTGAAA AGAGAAAAGA TCCCGACTGG CGTCCAACCA AAGAAATGCA AAAGCGTCAC
TTTGCTGAGC ATGGAGAGTA CCTCCCTGAC GTAGTTCCCG CAGGACCAAA CAACCCTTTT
GGTAAATATG CCTTACGACT AGGCACTAGT GAATACCTAA TTCATGGTTC TAATAAGCGT
TTTGGTATTG GTATGCGCGC TAGCTCAGGT TGTATTCGAA TGTATGATGA TGATATTAAA
TGGCTTTTTG ATAATGTTCC GGTAAATACT AAAGTGAGAG TCGTTAATCA ACCAGTAAAA
ATGTCTTTTG AAAATGGTGA TAAGCAATTA ATAGAGATAC ATCAACAGTT GTCAGATCTT
GAGACAACTA AAGGCAATGT TATTTTAACT AAAGCGATGC AACGATTTGT TGGTACTAAT
CGTGAATATT GGCAGCAACT ACTACCTGTT ATTGAAAAAC CACACGGATT AGTTGTTGAA
CTAGCTAAAT AA
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| Protein sequence | MIKNKRSLVT SLSFFIALIF IKPSTATVYE IESENKRLIG EPIIHTVVKG DYFQQLAEQY
DVGFLALLAA NPEHDPFLLK VDTEVVIPNQ MLLPFISRKG IVINLPELRL YYYSPEENKV
HVFPVGIGRQ GLSTPLTSTV IGEKRKDPDW RPTKEMQKRH FAEHGEYLPD VVPAGPNNPF
GKYALRLGTS EYLIHGSNKR FGIGMRASSG CIRMYDDDIK WLFDNVPVNT KVRVVNQPVK
MSFENGDKQL IEIHQQLSDL ETTKGNVILT KAMQRFVGTN REYWQQLLPV IEKPHGLVVE
LAK
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