| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4183 |
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| Symbol | lpxL |
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| ID | 3520374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4403276 |
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| End bp | 4404214 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286625 |
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| Product | lipid A biosynthesis lauroyl acyltransferase |
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| Protein accession | YP_270834 |
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| Protein GI | 71279912 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
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| TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.796584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGTAGCA ATAAAGTTTT ACAGCCAGAT TTTAAATTGT CTTTTTTATT ACCCAAATAT
TGGCTTACAT GGTTAGGCGT TTTTATTCTT TACACTATTT CATGGCTGCC TTTCAAACTT
CAGCTGTTCA TGGGACGTAT GCTCGGCCGA TTATTAATGA AAATTGGCTC CAAGCGTAAA
CACGTAGCCT TAACGAACCT TAGATTATGC TTTCCAGACA AAAGTGAAGA TGAATTACAA
ATATTATTAA AGAAAAACTT TGAAAATACA GGCATTGCAC TTTTTGAAAC CGGCATGGGC
TGGTGGTGGC CTGATTGGCG AGTAAAACGA AAGTTTAAAG TCAAAGGTTT AGAGCACCTT
GAAAAAGCAC GTAAAGAAGG CAATGGCGTT TTACTGCTTG CGATGCATTA TTTAAGTGTC
GAAATGAATG CAAGAGGCGT TGGTTATGGC CACCCTATGG TTGTTTTTTA TCGTCCTCAT
AATAATCAAT TGATGGAGTT CTTTCAGTTC AGAGGTCGAG GTCGTTCGAA TAAGTACATG
TTAGGTAAGC GTGATGTAAA AGGCTTAATG AAAGCGCTAA GAGATGGCGA AGCATGTATT
TACTTACCCG ATCAAGACTA TGGCAGAAAT CGTAGTGTTT TTGTGCCGTT TTTTGGTGTT
AAAGAGGCAG CAACGACAAC GGGTACTTTA ATCTTTGCTC GTCAAAAAAA TGTAGAAACC
ATGATGATTA TCCCAGTAAG AAACGACGAT GGCAGTGGCT ATACGTTGGA AATCATGCCG
CCATTAGAAA ACTTTCCCAC TCAAGATAAT ATTGCTGATG TCACTCGTAT CAATCAAGAG
TTGGAAAAAG CAATTTCACG AAAACCCGAA CAATACATGT GGTTGCACAG ACGTTTTAAA
ACGAGGCCAA ATCCTGATGA TGCTTCATTA TATAAATAA
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| Protein sequence | MSSNKVLQPD FKLSFLLPKY WLTWLGVFIL YTISWLPFKL QLFMGRMLGR LLMKIGSKRK
HVALTNLRLC FPDKSEDELQ ILLKKNFENT GIALFETGMG WWWPDWRVKR KFKVKGLEHL
EKARKEGNGV LLLAMHYLSV EMNARGVGYG HPMVVFYRPH NNQLMEFFQF RGRGRSNKYM
LGKRDVKGLM KALRDGEACI YLPDQDYGRN RSVFVPFFGV KEAATTTGTL IFARQKNVET
MMIIPVRNDD GSGYTLEIMP PLENFPTQDN IADVTRINQE LEKAISRKPE QYMWLHRRFK
TRPNPDDASL YK
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