Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4090 |
Symbol | phaZ |
ID | 3519666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4303836 |
End bp | 4305053 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637286533 |
Product | polyhydroxyalkanoate depolymerase, intracellular |
Protein accession | YP_270745 |
Protein GI | 71278143 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.102252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTATC AAACTTACGA CCTCTATAGT CGCTCCGCCG AAATGATGAA TGGTTTTATC TCAGTGAATC AACAATTACT GACTCATCCG TTTAACCCGT TTTCAAACAC CCTACTGGGA AAAAGTATCA ATGCAGCACT TGATAGTGCC TACCATCATA CTAAAGTTTA CGATAAACAA CCTTTTGACA TTAAAACAAC AATAATTGAT GGTGAAACGG TTAACATTGA CGAACAAGTT ATTTTAGCAA AACCTTTTTG TAATTTAATC CACTTCAAAC AAGATACTAA AGTTCAACAA CCTAAACTAT TTTTGGTTGC TCCACTTTCA GGTCATCATG CAACGTTATT AAAAGCAACA ATAGAGCGTT TAATTTTAGA TCATGACGTT TACATAACTG ATTGGCTAGA TGCTAAAAAC GTTCCTTTAT CTGAAGGCAA CTTTGATTTT GATGATTATG TAACTTACCT TATCGAGTTT ATGAAGGAAA TTGGCGAAGA TACCCATGTA TTAGCGGTTT GCCAACCTGC AGTTCAAGCA CTAATAGCAA CCGCTGTATT GGCTAAAGAT AAAGATGCCG CTACACCTAA ATCTCTAACA ATAATTGCAG GCCCGATTGA TACCAGTATC AATCCAAACG AACTCAATAA ATATGCCAGT AGTAAAGATT TAAGTTGGTT TGAAAATAAC GTCATAATGA CGGTGCCTGA GCGTTTTCCT GGTGCAGGAA GAAAAGTATA TCCGGGCTTT ATTCAATTAA CTTCTTTTAT GGCGATGAAT ATTGAAAATC ACGTCAAGAA ACACACTGAT TATTTTGGTC ATGTTTTTCA TGGCAAAGAA GATAAACAAG AAAGTCACCG TGATTTTTAT GATGAATACT TAGCTGTATT AGATCTTAAT AGTGAGTTCT ATTTAGAAAC TCTAGATCGT GTTTTCATTA ATCAAGATTT AGCGAATGGT AAAATGACTT ACCATGGTGA GCTTGTTGAT TTATCAGCAA TAACTGATAC TGCATTACAT ACCATTGAAG GGAAAAATGA TGATATTTGT TCATTAGGCC AAACTCAAGC AGCACAGGCT TTATGTTCTG GTATTCCAGA GCAAAACAAA TTGGATCAAG TTTTTGATGG TGTAGGCCAT TTTGGAACGT TTAGTGGCTC GGCTTTCCGT GAAAGAATAG CACCGAGTAT TGCAGAATTT ATTCAAAAAC ATAAATAA
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Protein sequence | MMYQTYDLYS RSAEMMNGFI SVNQQLLTHP FNPFSNTLLG KSINAALDSA YHHTKVYDKQ PFDIKTTIID GETVNIDEQV ILAKPFCNLI HFKQDTKVQQ PKLFLVAPLS GHHATLLKAT IERLILDHDV YITDWLDAKN VPLSEGNFDF DDYVTYLIEF MKEIGEDTHV LAVCQPAVQA LIATAVLAKD KDAATPKSLT IIAGPIDTSI NPNELNKYAS SKDLSWFENN VIMTVPERFP GAGRKVYPGF IQLTSFMAMN IENHVKKHTD YFGHVFHGKE DKQESHRDFY DEYLAVLDLN SEFYLETLDR VFINQDLANG KMTYHGELVD LSAITDTALH TIEGKNDDIC SLGQTQAAQA LCSGIPEQNK LDQVFDGVGH FGTFSGSAFR ERIAPSIAEF IQKHK
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