Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4078 |
Symbol | gshA |
ID | 3518481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4288123 |
End bp | 4289712 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637286521 |
Product | glutamate--cysteine ligase |
Protein accession | YP_270733 |
Protein GI | 71278731 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.479247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACACTAT CATTAACTGA TTATATTGGC GCTTTTAGCC AAAATAAAAA CTTGGCTGCC GTTGCCGGTA TTGGACGCGG TATAGAGCGA GAAGCCTTGA GAATATTACC AGAGGGTAAG CTATCGGAGC ATGGTCATTA TCATCAACTT GGTTCCGCGC TCACGCATGG ACAGATAACT ACTGATTACT CGGAAACCCT GCTTGAATTC ATTACTCCGG TTAGTTTTTC TCCAGAGCAA ACCATTGCAC AACTTCAAGA TATTCAAAAA TATACCTTTG ATAACATTGA AGGTGAATTA TTGTGGCCAA TGAGCATGCC TTGCTTTGTT GATGATGCTG AAAAAATACC CTTAGCGCAA TACGGCAGTT CAAATATCGG CACCATGAAG ACAGTTTATC GTCAAGGTTT GAAAAATCGC TACGGCTCAA TGATGCAAGT TATTTCAGGC ATACATTTTA ACTTTTCATT CTCTCAAGAC TTCTGGCAAG TGCAGCAAGA TTTGCATCAG TCATCCGGTG AAAAGTCATT ACCTATTAAT GATTTTATTT CTGAACGCTA CTTTTCTATC TTAAGAAATT ACAAACGATT CTGTTGGTTA ATCCCTTACT TATACGGAAG CTCTCCAGCA ATCTGTGGAT CATTTTTACA AGGTAAAGAA CATAAATTGC CTTTTAAGAA ATCTCCATTT GGCGCGCTTT ACCTCGAACA TGCCACCTCG TTGCGTATGA GTGACTTAGG TTATACCAGC TCTGAGCAGT CAGCACTGAA AATTTGTTAT AATAATTTAG CTGATTATGT TGATGGTGTT CAACAGGCTA TAAAACTTAA ATCTAACGAC TTTGCCAGCC TTGGTGTAAA AGTTGATGGT CAATACCAAC AGCTTAACGA TAACGTACTA CAAATTGAAA ATGAGCTGTA CGCACCTATT CGCCCTAAAC GAGTTGCTAA AGCAGGTGAA AAACCCTCAG ATGCTCTAGG AGAGCGTGGT GTTGAATATA TTGAAGTGAG GGCGCTTGAT GTAAATCCTT TTTCAGATAC AGGCATTAGC CTTGAGCAGG TTCACTTTTT AGATATATTT ATAACTTATT GTGCTTTTAT TGATAATAAA GAGTTTGATT GTACACGCCA GAAATTTCAT GAAGATAACA TGAATGCAGT GGTTCTTCGT GGTCGAGATC CTGAATTATT ACTTAGCGAT GCTAATTGTA GTGGTGAAGT TACGCTTAAA TCGGTTCCTG AGTGGGGCAA TGAATTATTC GAGCAGATGA AGCAAGTTGC ACAACTGTTA GATAAATCAT ACCAAACCAG TAAATACAGT GAAGCTATTG TTCGTGAACA AGCTAAAATT AATGATTCAA GCTTAACACC TTCCGCACAG TTGTTATCGA TTATTCAAGA GCAATCTTTA TCGCAATTTG CTTTAGATAA AGCGATTGAA TATCAACGAG AAGCTAAAGT GCGTGATTAT CAATCCTATG ATCAAGCATT TTTTGATGCA AGCGTTCCTG ACTCTCATAA AGCTCAAGCA GATATTGAAG CAGGTGACGA ACTAAATTTT GATGACTTTT TATCAGATTA TTTCGCATAA
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Protein sequence | MTLSLTDYIG AFSQNKNLAA VAGIGRGIER EALRILPEGK LSEHGHYHQL GSALTHGQIT TDYSETLLEF ITPVSFSPEQ TIAQLQDIQK YTFDNIEGEL LWPMSMPCFV DDAEKIPLAQ YGSSNIGTMK TVYRQGLKNR YGSMMQVISG IHFNFSFSQD FWQVQQDLHQ SSGEKSLPIN DFISERYFSI LRNYKRFCWL IPYLYGSSPA ICGSFLQGKE HKLPFKKSPF GALYLEHATS LRMSDLGYTS SEQSALKICY NNLADYVDGV QQAIKLKSND FASLGVKVDG QYQQLNDNVL QIENELYAPI RPKRVAKAGE KPSDALGERG VEYIEVRALD VNPFSDTGIS LEQVHFLDIF ITYCAFIDNK EFDCTRQKFH EDNMNAVVLR GRDPELLLSD ANCSGEVTLK SVPEWGNELF EQMKQVAQLL DKSYQTSKYS EAIVREQAKI NDSSLTPSAQ LLSIIQEQSL SQFALDKAIE YQREAKVRDY QSYDQAFFDA SVPDSHKAQA DIEAGDELNF DDFLSDYFA
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