| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4067 |
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| Symbol | trmD |
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| ID | 3521532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4276636 |
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| End bp | 4277397 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637286510 |
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| Product | tRNA (guanine-N1)-methyltransferase |
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| Protein accession | YP_270722 |
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| Protein GI | 71281063 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGATTG GGGTGATAAG CCTTTTTCCC GAAATGTTTA ATGCTATCAC GGAGTACGGG
GTAACAGGCC GAGCGATTCG CAATGGGTTA ATTGATTTTC ATTTATGGAA TCCAAGAGAC
TTCACCCATG ATAAGCATCG TACCGTTGAT GATCGTCCTT ATGGCGGTGG TCCGGGCATG
TTAATGATGG TGCAACCATT ACGAGATGCC ATTGCAGCTG CGCGTAAAGC GGCAGAAGTT
AATGGCGGTA AAGCTAAAGT TATCTACTTG TCTCCGCAAG GAAGAAAGCT TGATCAACAA
GGCGTAAGTG AATTAGCACA ACATGATCGA CTAGTATTTA TTGCTGGTAG GTATGAAGGC
ATAGACGAGC GACTAATCGC GTCAGATATT GACGAAGAGT GGTCGGTTGG CGATTACATT
TTAAGTGGTG GTGAACTCCC TGCTATGAAT GTTATTGATG CTGTAGCACG CTTAGTGCCA
GGGGTATTAG GACATAAAGA ATCAGCAGAG CAGGACTCCT TCTCTAACGG TTTATTAGAT
TGTCCTCATT ACACTCGGCC AGAAGTACTA ACAACTCCTC AGGGAGATGA AATGTCAGTA
CCAAAAGTAT TGTTAAGTGG TAATCATGAA CACATACGCT TATGGCGACA AGAGCAATCT
TTGCTAAGAA CGTGGACTAG AAGACCAGAA CTATTAAACA ACCTAGCTCT GACAGCTGAG
CAGGAGAAAG CACTTACTTT GATTAAAAAG CAAGTGAAAT AA
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| Protein sequence | MWIGVISLFP EMFNAITEYG VTGRAIRNGL IDFHLWNPRD FTHDKHRTVD DRPYGGGPGM
LMMVQPLRDA IAAARKAAEV NGGKAKVIYL SPQGRKLDQQ GVSELAQHDR LVFIAGRYEG
IDERLIASDI DEEWSVGDYI LSGGELPAMN VIDAVARLVP GVLGHKESAE QDSFSNGLLD
CPHYTRPEVL TTPQGDEMSV PKVLLSGNHE HIRLWRQEQS LLRTWTRRPE LLNNLALTAE
QEKALTLIKK QVK
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