Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4048 |
Symbol | |
ID | 3520250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4257158 |
End bp | 4258447 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637286493 |
Product | hypothetical protein |
Protein accession | YP_270705 |
Protein GI | 71279789 |
COG category | [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily [TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.129032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATT ATATTTCAAT GGTACCTCTA TCGTCAGGTG GTGATGGTTC GTTAACTGCT TTATTAACGT CAATTTCTCC AAAAGTCAGC GACATCCTCA ATAAGGCGCT CAATGATGAA GATATCAGTG AGCAAGAAGG ATTGGTCTTA TTCGATACCC AAGGGCTTGA GCTTGATGCT TTAATTGCGA CTGCCGATGA GTTGCGGATG AAGACTGTTG GTAATTGTGG GACCTTTGTG ATTACCCGTA ATATCAACTT CACCAATGTC TGTAATATGG GCTGTAAGTT CTGTGGTTTT GCCAAACGTA AAACCGAAGC AGGTGCTGAA TTGTTGTCGA TGGATGAAAT TGCAAATCGT GCCCAGGAAG CTTGGGATCG TGGTGCCACT GAAGTTTGTA TCCAAGGCGG TTTACACCCA GATCTTAAGG GCGATCACTA TCGTAATATT TTAAAAGCTA TCAAGACGCA GGTGCCTGAG ATGCATATCC ATGCATTTTC ACCGTTTGAA ATTTGGTATG GCGCTCGCAA AAGCAGGATG TCTACAGCAG ATTTTATCCA GGATTTAATC GATCATGGGC TCGGATCTAT GCCAGGCACG GCGGCGGAAA TTCTTGATGT GGAGATCCGT AAACAACTGA CCAAGGATAA ACTCAGTACT GAACAGTGGG TAGATATAAT CACTACAGCT CACAAACTGG GTTTACCAAC CACTGCTACC ATTATGTATG GCCATGTTGA CAGCCCGAAA CACTGGGTAG AGCATATTGG TAAGATCCGC AGTATTCAGC AACAAACCGG CGGTTTCACT GAGTTTGTGC CACTGGGATT TGTCCACTAT GAATCGCCAC TGTATCTGAG CAACCCTAAT GTTCGTCCAG GCCCGACGCC AGATGAAAAT ATCAAGATGC ATGCCATTTC ACGAGTAATG CTCAATGGCT GGATCGACAA CATCCAAGCA TCATGGGTCA AACTAGGACC GGATTATGCC ACCGCAATGT TACGGGCAGG TGCCAACGAT ATTGGCGGCA CTTTAATGAA TGAAAGTATT ACCCGGGCCT CCGGCGGTAA AAACGGTCAA GAGATTATGC CAGCCGATAT GGTAATGATG ATCGAAAAAG CAGGTTTAAG CGCTGTGCGT CGTAATACCC TATATAAATC GGTTGAAACC TTCGAGCGAT CTTCACCTCT TGAAATTGTC AAAAATACCT GTCCCCAAAC TATTTCTGTG GTGGAAATAG CAGTAACAGA AGATGCTGCT TTGCCAAGAG TTTCTGGAGG TTTGTTATGA
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Protein sequence | MNNYISMVPL SSGGDGSLTA LLTSISPKVS DILNKALNDE DISEQEGLVL FDTQGLELDA LIATADELRM KTVGNCGTFV ITRNINFTNV CNMGCKFCGF AKRKTEAGAE LLSMDEIANR AQEAWDRGAT EVCIQGGLHP DLKGDHYRNI LKAIKTQVPE MHIHAFSPFE IWYGARKSRM STADFIQDLI DHGLGSMPGT AAEILDVEIR KQLTKDKLST EQWVDIITTA HKLGLPTTAT IMYGHVDSPK HWVEHIGKIR SIQQQTGGFT EFVPLGFVHY ESPLYLSNPN VRPGPTPDEN IKMHAISRVM LNGWIDNIQA SWVKLGPDYA TAMLRAGAND IGGTLMNESI TRASGGKNGQ EIMPADMVMM IEKAGLSAVR RNTLYKSVET FERSSPLEIV KNTCPQTISV VEIAVTEDAA LPRVSGGLL
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