| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4027 |
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| Symbol | |
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| ID | 3521947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4232364 |
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| End bp | 4233956 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637286473 |
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| Product | BCCT family transporter |
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| Protein accession | YP_270685 |
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| Protein GI | 71281475 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGCGA ATCATGGTCT GTTAAAAGGC ATGAATCCAG TTACAACACT TGTATCAATG
GCTATAATTA CTCTGTTTGT TTTGTGCGGT GTGTTTTTCA CTGAACAAAC AGCAGCATTA
TTTACGGCGG TATCGGGTTG GATACTGTCT TATCTTAAAT GGTATTACAT TGGCATTGTT
GCAATATTCT TGTTCTTCTG TATCTGGCTG GCATTTAGTC GCTACGGTAA CTTACGTTTA
GGTGATGATG ACTCAAGACC TGAATACAGT AACTTCTCGT GGTTTTCCAT GTTATTTAGT
GCAGGAATGG GTATAGGCTT AGTCTTTTGG TCTATTGCGG AGCCTATTTA CCACTTTCAA
AGTAATCCAT TTATCACTGA AGGATTAACG CCGGAAGCAG CACAAGTAGC GATGCGTCTA
ACCTTTTTCC ATTGGGGGCT TCACCCATGG GCAATTTATG TAGTTGTTGG TTTGTCGTTG
GCTTATTTTT CTTATAGAAA GAAATTACCT TTGACCATCC GTTCAGCACT TTACCCATTA
ATTGGGAAAA AAATGTACGG TCCAATTGGG CATGCAGTTG ATGTGCTTGC CGTGTTTGGT
ACTGTATTTG GTGTAGCAAC GTCGTTAGGT TTAGGCGTTA CTCAAATGAA TACTGGCCTT
AATACCATGT TTGGTATGGA GGTTTCTCTG AGTAATCAAA TTATACTGAT TGCTGTTATT
TCTGCTATTG CGACAATTTC AGTGGTATCA GGTGTCGGTA AAGGTGTAAA AATCTTATCG
GAAGTCAATA TGTGGTTGAC CATTGGTATT TTGGTATTTT TACTTTGTTT TGGTCCTACT
CGTTATTTAT TGGGTGCTGT ATTGCAAAGT ACTGGTGATT ATTTAGGTAA TGTCTTATCA
CTAAGTACCT GGACTGATGC TAACGAAAAT AGTCAGTGGC AATCTTGGTG GACCGCATTT
TATTGGGGTT GGTGGATGTC TTGGGCACCA TTTGTAGGTA TGTTTATTGC GCGTATCTCT
AAAGGTCGTA CCATTCGTGA GTTTATTGTT GGCGTATTGT TAGTACCCAC TATGCTAGGT
TTTATTTGGT TAACTCTTTT CGGAGGCACC GCTATATACC TAGAGCTGTT CCATCAAGTA
ACCAATGAAG CAGGAGAACT AGTTGCTGCT GTTGGACAAG CGGGTATTGT TGATGCTGTT
AAGGCAGATG TAACTTCAGC GCTATATGTA ACATTAGACA AGCTTGATGC TGGCTTCATG
GGTACTATCG CAGCATTTAT GGCGACATTA CTTATTGCGA CCTACTTCAT TACTTCATCA
GATTCAGGCA CGTTAGTGGT TACCACTATT TTGTCAATGG GTAATGAACA TCCACCAACG
GCTCATCGTG TAGCATGGGG ATTAGGTGAA GGCGCTGTCG CGGCCATCTT ATTATTGGTA
GGAGGACTGA AAGGTCTGCA AACCGCCGCT ATTACCGCCG CATTACCTTT TTCATTAGTC
ATGATAGTTA TGATGTGGGG GTTAATGAGA TCACTAAAAG AGGAGAAGTT GACTCCTGCG
GTATACGCTC CAGCTAAGCT AGTGACTAAC TAG
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| Protein sequence | MVANHGLLKG MNPVTTLVSM AIITLFVLCG VFFTEQTAAL FTAVSGWILS YLKWYYIGIV
AIFLFFCIWL AFSRYGNLRL GDDDSRPEYS NFSWFSMLFS AGMGIGLVFW SIAEPIYHFQ
SNPFITEGLT PEAAQVAMRL TFFHWGLHPW AIYVVVGLSL AYFSYRKKLP LTIRSALYPL
IGKKMYGPIG HAVDVLAVFG TVFGVATSLG LGVTQMNTGL NTMFGMEVSL SNQIILIAVI
SAIATISVVS GVGKGVKILS EVNMWLTIGI LVFLLCFGPT RYLLGAVLQS TGDYLGNVLS
LSTWTDANEN SQWQSWWTAF YWGWWMSWAP FVGMFIARIS KGRTIREFIV GVLLVPTMLG
FIWLTLFGGT AIYLELFHQV TNEAGELVAA VGQAGIVDAV KADVTSALYV TLDKLDAGFM
GTIAAFMATL LIATYFITSS DSGTLVVTTI LSMGNEHPPT AHRVAWGLGE GAVAAILLLV
GGLKGLQTAA ITAALPFSLV MIVMMWGLMR SLKEEKLTPA VYAPAKLVTN
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