| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4024 |
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| Symbol | fdhA2 |
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| ID | 3519490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4227523 |
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| End bp | 4230423 |
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| Gene Length | 2901 bp |
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| Protein Length | 966 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637286470 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_270682 |
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| Protein GI | 71278181 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAACTT ATTATGATCC CAAAACAGAG CCTGCTGCCA ATCAATCAGC CGACCTTAGT
AAAGATTTAG GCACACCGCC TTCTAAATCT ACGGTACAAG TTAGCGTAGA AATTGATGGT
GTTACTATTG TTGTACCTGA AGGAACTTCA GTATTACGCG CTGCCGCTAT TGCCGATATT
AATATTCCCA AATTATGTGC CAGTGATAAT TTAGAAGCCT TTGGTTCATG TCGTTTGTGT
GCGGTAGAGA TCGAAGGCAT GCGCGGCATG CCAGCTTCTT GTACTACACC GGTAAGAGAG
GGCATGAAGG TACAAACGCA AAATCCTAAA ATAGCGACAT TACGTCGTAA TGTTATGGAA
CTTTACATTT CAGACCATCC ATTAGATTGT CTTACCTGTC CGGCCAATGG TGATTGTGAG
CTGCAAGATA TGGCAGGTGC CGTCGGTTTA CGTGAAGTAC GCTATGGTTT TGAAGGAAAA
AATCACCTCG ACGGAGCAAC TGATTCGTCG AATCCTTATT TCAGCTTTGA TGATTCTAAA
TGTATTTCCT GTTCTCGTTG TGTCAGAGCG TGTGAAGAAG TACAAGGTAC CTTTGCCTTA
ACGGTTGAAG GTAGAGGTTT TGATTCACGT ATAAGTACTG GTCAAGACAC TAACTTTCTA
GAATCTGACT GTGTTTCATG TGGCGCCTGT GTACAAGCTT GTCCAACAGC TACACTCACT
GAAAAATCTG TAATAGATAA TGGCCAGCCA GATCATAGCA TCATTACTAC CTGCGCTTAT
TGCGGTGTAG GCTGTTCGTT CCGCGCTGAT ATGCAAGGCG ATAAAGTACT GAGAATGGTG
CCAGATAAAA ATGGTAAAGC GAACCAAGGA CATTCTTGTG TTAAAGGCCG ATTTGCTTTT
GGCTACGCTA CTCATCAGGA CAGAATAACT AGCCCGATGA TTCGCGATAA TATAGAACAA
GACTGGCGTG AGGTGAGTTG GGAAGAAGCA TTAGCCTTTG CTGCTAAGCG CTTAACCGAT
ATTCAAGAAG AACATGGCCG CAACAGTATC GGCGCGATAA CGTCGTCTCG TTGTACCAAT
GAAGAAACCT ATTTAGTACA GAAACTAGTC CGTGCAGTTT TTCAAAATAA TAATGTCGAT
ACCTGTGCCC GCGTTTGTCA TTCGCCAACA GGTTATGGCC TAAAAGCTAC CTTAAACGAG
TCAGCAGGAA CACAAACCTT TGAATCGGTG ATGAAAGCTG ATGTGGTACT CATCATTGGC
GCCAACCCTA CCGATGCGCA TCCGGTATTT GGTTCATTAC TTAAACGTCG TTTACGCCAA
GGGGCTAAAT TAGTAGTGGC CGATCCGCGC AGCATCGATC TTATCGACAG TCCGCATACC
AAAGCACAAC ATCATCTTAA ACTGCGTCCT GGGACAAACG TGGCATTAAT CAATGCCCTC
GCCCATGTCA TTGTTGATGA AGGTTTAGAA GATGCTGACT TCATTCAAAG TCGTTGTGAT
GATGCTAGCT TCCAGCAATG GTACAAACAT ATTCAAGACC AACGCCATTC ACCAGAAAGC
ACAACAGAAA TTACCGGTGT CGACGCAACA GAGTTACGCG CAGCGGCCAG ACTATATGCT
AACGCGGGTA ACGGCGCTAT TTATTACGGT TTAGGTGTTA CAGAACACTC TCAAGGCAGT
TCATCTGTCA TGGCTATTGC TAACTTAGCA ATGGTTAGCG GAAATATTGG TCGAGAAGGT
GTTGGTGTTA ATCCACTGCG CGGCCAAAAT AATGTACAAG GCTCATGTGA TATGGGTTCG
TTTCCACATG AGTTGCCAGG ATATCGCCAT GTTAGCGATG AAAGCACCCG TAATTTATTT
GAACAAGAAT GGCAAGTTTC ATTGGATTGT GAGCCTGGTT TGCGCATTCC AAATATGTTC
GAAGCAGCAA TACACGGTGA CTTTAAAGGT TTGTATTGCC AAGGCGAAGA TATTGCTCAA
TCGGATCCAA ATACTCAGCA TGTACAAAAA GCGTTAAGTT CGATGAAATG CATCATTGTA
CAAGATATCT TCCTTAACGA GACGGCAAAA TACGCCCATG TATTTTTACC CGGCTCATCG
TTTATGGAAA AAAATGGTAC CTTCACCAAT GCCGAACGAC GCATTTCTAG AGTACGTAAA
TTGATGCCAG CACTAGCAGG TAAAGAAGAT TGGCAAGTAA CGATTGAACT TGCCAAAGTA
CTCGGTTATG AAATGAATTA TGAGCATCCA AGTGAGATAA TGGATGAAAT TGCCCGCTTA
ACACCAACAT TTAGTGGTGT CAGTTATGAA AGGTTAGATC AGCTTGGCTC TATTCAATGG
CCATGTAATG AAAAATCGCC TCTAGGCACG CCAATTATGC ATACCGAGGA TTTTGTTGGC
GAAAAAGGCA AGTTTGCGAT TACTGAGTAT GTGGCCACAC CTGAAAAAGC GAATAAGCAT
TTTCCGTTGT TATTGACCAC AGGCCGTATT TTAAGCCAAT ATAATGTTGG CGCACAAACA
AGACGTACTG CCAATCAAGT TTGGCACGAT GAAGATGTAT TAGAAATCCA CCCTAATGAC
GCTGAAGATC GTGGCATCAA TGATGGTGAT TGGGTAGGTA TTGCCAGTCG TGCAGGTACC
ACCGCACTAC GCGCACTCAT TAGCCAACGC GTTCAACCAG GGGTTGTTTA TACTACCTTC
CATCACCCGT TAAGTGGTGC CAATGTAGTC ACCACTGACA ATTCTGATTG GGCAACTAAC
TGTCCTGAAT ATAAGGTAAC AGCAGTGCAA GCAACTAAAG TTGATGAGCC GTCGCAATGG
CAAGCAGAAT ACGCCCAGTT CAGTCAGCGA CAAGCGAAAT ACTTAAAGAA TAAAAATGGG
GGGGAAGTTG CTAAAACATG A
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| Protein sequence | MITYYDPKTE PAANQSADLS KDLGTPPSKS TVQVSVEIDG VTIVVPEGTS VLRAAAIADI
NIPKLCASDN LEAFGSCRLC AVEIEGMRGM PASCTTPVRE GMKVQTQNPK IATLRRNVME
LYISDHPLDC LTCPANGDCE LQDMAGAVGL REVRYGFEGK NHLDGATDSS NPYFSFDDSK
CISCSRCVRA CEEVQGTFAL TVEGRGFDSR ISTGQDTNFL ESDCVSCGAC VQACPTATLT
EKSVIDNGQP DHSIITTCAY CGVGCSFRAD MQGDKVLRMV PDKNGKANQG HSCVKGRFAF
GYATHQDRIT SPMIRDNIEQ DWREVSWEEA LAFAAKRLTD IQEEHGRNSI GAITSSRCTN
EETYLVQKLV RAVFQNNNVD TCARVCHSPT GYGLKATLNE SAGTQTFESV MKADVVLIIG
ANPTDAHPVF GSLLKRRLRQ GAKLVVADPR SIDLIDSPHT KAQHHLKLRP GTNVALINAL
AHVIVDEGLE DADFIQSRCD DASFQQWYKH IQDQRHSPES TTEITGVDAT ELRAAARLYA
NAGNGAIYYG LGVTEHSQGS SSVMAIANLA MVSGNIGREG VGVNPLRGQN NVQGSCDMGS
FPHELPGYRH VSDESTRNLF EQEWQVSLDC EPGLRIPNMF EAAIHGDFKG LYCQGEDIAQ
SDPNTQHVQK ALSSMKCIIV QDIFLNETAK YAHVFLPGSS FMEKNGTFTN AERRISRVRK
LMPALAGKED WQVTIELAKV LGYEMNYEHP SEIMDEIARL TPTFSGVSYE RLDQLGSIQW
PCNEKSPLGT PIMHTEDFVG EKGKFAITEY VATPEKANKH FPLLLTTGRI LSQYNVGAQT
RRTANQVWHD EDVLEIHPND AEDRGINDGD WVGIASRAGT TALRALISQR VQPGVVYTTF
HHPLSGANVV TTDNSDWATN CPEYKVTAVQ ATKVDEPSQW QAEYAQFSQR QAKYLKNKNG
GEVAKT
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