| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4021 |
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| Symbol | |
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| ID | 3519913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4223901 |
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| End bp | 4224962 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286467 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_270679 |
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| Protein GI | 71279454 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.322888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTAG TACCATCAAC TAGCAGTCAG GCACAGATAA AATGTAAACA TATTGGTTTT
TTATTACAAC CCAACTTTAC CATGTTAGCG TTGTCCTCGG CAATTGCGCC ATTGCGAATG
GCCAATCAAT TGTCTGGAGA ACAACTATAT CGTTGGACTA TTCTCAGTGA AGATGGCGGC
GTTGTTACTG CCAGTGATGG ACTGAAGATC GAGGTTGATT CTTGCATCAA TAACTATGTT
GAGTTTGATA CTGTGTTGGT TTGTGGCGGT GTAGATATAA AAGGCACAGT GACGCGAAAA
GTGCTTAGCT GGTTAACCCA TTTATCTCGC TGTAATATCG TGCTAGGCGG CATTTGCACG
GGCAGTTATT TATTGGCTAA AGCGGGTTTA TTAAACGGCT ATCAAAGCAC CATTCATTGG
GAATTGTTGG CGAGTTGTCA GGAAGAGTTC CCTTTAATAA AAAGCTCCAA TCAATTGTTT
ATACTTGACC GTAATCGCAT GACTTGTTCA GGCGGTACAG CACCTATTGA TATGATGTTG
CAGGTGATTT CTAAAGAGTA CGGTAAAGCT TTAACAACGG CTATTTCAGA CATGTTTTCT
CATGAACATA TTCGTGATGA AAACGACCAG CAACGCATAC CATTACAGCA TATTGTTGGT
GCTACTCAGT CAAAATTGCA AGATGTAGTC GCGTTAATGG AAGCAAATAT TGAAGAAATA
TTATGCCTAG ATGAATTAGC TAGTTTTGTT GATTTATCTC GACGTCAGTT AGAGCGATTG
TTTCAAAAAT ATCTCAACTG TTCGCCGCAT CGTTATTATT TACAGTTACG ATTAGGAAAA
GCACGTCAGT TATTAAAGCA AACCAATATG TCTATTATTG AAATTGCTAT AGCATGTGGT
TTTGTTTCTA CGCCGCATTT TAGTAAGTGT TATCGTAATT CTTTTAGCAT TCCGCCCCGA
GATGAGCGCA ACGTTTTAGC TAAAAATAAG CAATTTGCTT CCAGTAAAGA ATCCAGCTTG
GGATCGGTTA AGGTTCAACA TCAACATCAA CAACATCACT AA
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| Protein sequence | MPLVPSTSSQ AQIKCKHIGF LLQPNFTMLA LSSAIAPLRM ANQLSGEQLY RWTILSEDGG
VVTASDGLKI EVDSCINNYV EFDTVLVCGG VDIKGTVTRK VLSWLTHLSR CNIVLGGICT
GSYLLAKAGL LNGYQSTIHW ELLASCQEEF PLIKSSNQLF ILDRNRMTCS GGTAPIDMML
QVISKEYGKA LTTAISDMFS HEHIRDENDQ QRIPLQHIVG ATQSKLQDVV ALMEANIEEI
LCLDELASFV DLSRRQLERL FQKYLNCSPH RYYLQLRLGK ARQLLKQTNM SIIEIAIACG
FVSTPHFSKC YRNSFSIPPR DERNVLAKNK QFASSKESSL GSVKVQHQHQ QHH
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