Gene CPS_4003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4003 
Symbol 
ID3522261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4201041 
End bp4201964 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content40% 
IMG OID637286449 
Productmembrane protein 
Protein accessionYP_270661 
Protein GI71281789 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0116416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAA GCTTAGGGTT TAAGGTCTCA GTAAGCTTCG TTAATATATT TGCATTACCC 
TTCTTTTTTG TATTGCTTTA TGGCAGTGGG TTTGTAGGTG CAAAACTCGG ATTACCACAC
TCCACTCCTT TGAGTTTTCT AAGTTTACGC TTCATGGCTG CAGGTTTGAT ATTACTAATT
ATTGCGAAAT TGATTGGTAA CCAACTCCCG AACTGGCGTG AAGCGATACA TATTTCGGTA
GCTGGAAGCT TAACTGTCTG TCTATTTTCT GTTGGTGTAT TTGTATCAAT TGATATGGGG
CTTTCCCCAG CAGTTTCGGC ATTAATTGTT GCACTACAGC CTATTCTGGT AGCTCTATTT
GCACGAAAAC TGGTTAATGA ACAACTTAAC TTAGCCCAAT GGTTTGGATT GCTCTTTGGA
TTTTTAGGAG TCATCGTCGT TGTCATTGAT TCAATTGAAA CAACGTCTTT CAGTTGGGTT
GCTATAGCTA TGTCCGTGCT TGCTTTGTTT GGTGTTACCT TTGGAAGTCT TTATCAGAAG
CGTTATTGCG CAGATATGGA GATATTTTAT GGAGGTGCGA TTCAGTCTCT GGTTTCGGGC
TTAATATGTT TAGCATTGTT ACCGTTTTTT GAAAGCTTTA AGGTCGTTTG GACAGGTGAA
TTTATTATAT CGCTAGTTTA TATGGTCGTC GGGGTATCAC TAGGGGCATT AAGCTTGCTT
TATATAATGA TCCAGCGGGG AGAGGTAAGC AGAGTCGCAA GTGTATTTTA TTTAGTCCCT
GTTTCTGCGG CAGTTAGTGC TTATCTTTTA TTTGGTGAAA CCATTGAGAG CACTACATTG
TTCGGGGCAA GCATTATTGC TTTGGGTATT TTCCTGACCA ACCGTAAATC TCAAAATAAC
ATGGTGGTTT CTATGAATAA ATAG
 
Protein sequence
MSKSLGFKVS VSFVNIFALP FFFVLLYGSG FVGAKLGLPH STPLSFLSLR FMAAGLILLI 
IAKLIGNQLP NWREAIHISV AGSLTVCLFS VGVFVSIDMG LSPAVSALIV ALQPILVALF
ARKLVNEQLN LAQWFGLLFG FLGVIVVVID SIETTSFSWV AIAMSVLALF GVTFGSLYQK
RYCADMEIFY GGAIQSLVSG LICLALLPFF ESFKVVWTGE FIISLVYMVV GVSLGALSLL
YIMIQRGEVS RVASVFYLVP VSAAVSAYLL FGETIESTTL FGASIIALGI FLTNRKSQNN
MVVSMNK