| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3969 |
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| Symbol | |
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| ID | 3522336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4159945 |
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| End bp | 4164942 |
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| Gene Length | 4998 bp |
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| Protein Length | 1665 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637286415 |
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| Product | putative lipoprotein |
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| Protein accession | YP_270627 |
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| Protein GI | 71281864 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACTA ACTTTATCTC TCCAATCTTT CTTTGGACAC TACTATTACT CGCCAATATG
ATGCTGTTCG GCTGTGGCGA GCAAAATAGC AAGCCAGTGA AAGAGGGATC AGATGTTAAG
GTGTCAGTTG ATGCTGAAGT CAGTGCGAAA CAGACAATCG CTAGCGGTGA ACCTAATGAA
AGCAGTTTTA ATTTACAGCA AGTACAAAAA GACTATGGTG AAACACCTCT TAGCGTACTA
GACGTTTCTG AACGTAGCAA AGACGGTAGA AATTCTGTTG CCATTACATT ATCTGTTCCC
CTAGACCCTT CTAAAAATCA CCAGCAATAT TTTAATATCA GTGCTGCAGA TAAAGGCGCT
ATCGACGGTG CATGGGTTAT TTCAAAATCA GGCAAAACTA TTTGGTTTCC GTATGTCGAC
CCCGATACTT CTTTTGATGT CACCATTTAT CAAGGTTTAG TGGCTGCTAA TGGCAAAGTT
TTAAGTAAAA CGATAAACAA AAAAGTTAAA ACCAGTAGCA TCACTGCGAG CATTAACTTT
GATACTACGG GAGCCTTTTT AACTCAGGGT TTAGGCAATG GTTTACCGGT AGTATCGGTA
AACATTGATG CAGTAGATCT TAATTTTTAT CAAGTAAACG ATAAAGATCG TCAACATTTT
TTGCAAGAAA TGTCCTATAA AAACTATCGC TGGGATATGA AGAGAATTAC TCAATTTAGC
GAGCTTGTTT ATAGTGGTCG GTACGATCTC GACCAACCTA AAAATACCCG CGTTAAACGC
AGTATTAACA TTGAAGGCAT AGCACAGCTC TCAGAGCCAG GTATCTACTT AGCTGTGATG
ACCCAAGCGG GTGCCTATGA TAATCATCAG GTTATGTGGT TCTCTGTGAC GGATATCGGT
CTTCATGCCC GTTTCTATAA TAAACAATTA GATGTTTACG CCTCTTCATT AAAAACCGGT
AAAGCTATAG GAAACGTTGC TGTGACCTTA GTGAATGACA AGGGCAATAT CTTACAGCAA
GGTGTTACCT CGCCAAGTGG TGAAGCTTCA TTTGCCAGTG ATTTAACTGC AGCGTCATTA
ATCATTGCGC AAAATGAACA GCACTTCTCC ATTATTGAGC TTAATAAACC GGCACTAGAT
TTGTCAGACT TTGATCTTGG TCTTCGCCCA TATAGAGCCC AAGAGTTATT TATATATGCA
CCGAGAAATT TATATCGTCC AGCAGAGTTT GTCGATTTTA ATGCTTTATT ACGTAGTGAT
GATGGCAAAT TAACTGTAAA AAGTATTTTA TCTGCCGCGA TAAAAAGCCC CGATGGCAGC
AAAATAAAAA CCTTTAAGTG GCAAGGAGAT GAACAAGGTT TTTATCATTA TCAGTGGCAA
ATCCCCAAGA GCGCTGCATT AGGTAATTGG CAACTTGAAG TAGTGAATGT TAATCGAGAA
AGTTTTACTT ATGACTTTAA AGTGGAAGAG TTCTTACCTG AACGATTAAA AATCACTTTC
AATGCTAAAG CGCCACAAGA ACGATTGCTA GCCACTAAAA AACAACACAT TAAGTTGCCG
ATTTTAGGCG AGTATTTATT TGGTGCGCCA GCGTCAGGTA ATCGACTTTC TACCCAAGTG
AATACCACAC AGTGGCGAAA CCCTGTTGAG ACCTTACCAA AATTTGAATT TGGCGATATT
AGACAAACGC GTTTCAATAA TCGTACGGAA CTTAAAGACA TTGAATTAGA TGCCAAAGGA
CAAGCAATTA TAAGCTACCA AGGTGATTGG AGTGGTTTGC ATAGCCCATT AAAAGTTAAT
TTTATCAGTA GTTTATTTGA ATCGGGTGGT CGCCCTGTAA CACGTGCCTA TTCAGCTTTA
GTGTGGCCCA GCGATAAAAT GTTAGGGATT AGAAGCAGTT TTGGCGAAGA TAATCCGGCC
GCAAATTCAA CGGTTATTTT TGACATTGTT AAAGCGTCAC TTGATGGCAC TAAACATAGC
GCGAATGCTT TAGATATTAA ATTGATACGT GAAGACCGAC GTTATTTTTG GGTGTATTCT
CAAAATAGAG GTTGGCATTA TGAATGGAAT GATAATGAGT TTGTTGAGCT AACAAGCTCG
TTGACGATAA AAGACGGTGT AACAGCAAGC GTTGATTTTC CTGTTACTTG GGGCCGTTAT
CGCCTCGAAG TACGTGATGT TAACAGCGGT TTATTATCAA GTGTGCAGTT TTATGCCGGC
ACCAATTGGT ATGCAGATTG GAAAAAAAGT CAATCAGGCA GCGGTGCTGC TAGACCTGAC
AAAGTGACCA TGGCGCTGGA TAAAGCAAGT TACGCCGCAG GAGATCTGGT CAAAGTGAAT
ATTGTTCCTC CCCAGGCCGG TGAAGCCATC ATTCTAGTGG AAGGAAATAG CCCGCTATGG
TCAACGCGTC AGTTTATTCC TGCTGAGGGT GCCATAATTG AAATCCCTGT ATCGGCGGAT
TGGCAACAGC ATAATATTTA TATCAGTGCG CTGGTCTTAC AGCCGGGCGA TAAACTCAAA
ACCATAACCC CTAAACGTAG TTTTGGCTTG GTTCACCTAC CACTTCAGCG TGAATCACAA
CAACTCAATA TTGAGTTTGA GGTTGCTGAA AAAGCACTTC CCAATAAAAT ATTACCAGTG
CAAATAAAAG TGACAAATGA AGTCGGTCAT CAAGTAGGTC AGAACACGGA AGCAGCGCCA
ATAGCTGAAA AAGTTTTTGT GACACTTGCT GCAGTTGATG TAGGTGTATT AAGTATTAGT
GAGTTTAAAA CGCCAGATCC CTTTGAGGCA TTTTTTGGCC AGCGACGATA TGAAGTCGAT
TCTCGGGATG TTTATAGTAA AGTTATTGAA GTTAACCAGG CTGAAAATGC CCGCTTACGT
TTTGGTGGCG ATAGTGATTT AACGCGAGGC GGCAAGGAGC CACAATCGGA TGTGCAAATT
GTTTCTTTAT TTAGTGGTTT AGTGTCATTA GATGAACAGG GCGAGGCCAT CATTCCATTA
GATATTCCTG ATTTCAATGG TCGGATTCGC TTAATGGCCT TATCTTTTTC TGCCGATAAA
TTTGGTCATA ACGATAAAGA AGTCACTATA GCAGCCCCCG TTGTTACCCA GCTGGCTATG
CCGCGATTCT TAGCGATGGG AGATGAAACT ACCCTGGCCT TAGATGTAAC TAACCTCAGT
GGTGAACAGC AGCAGTTAAC TGTACAGCTA AGCAGTTCAG GACCCGTTGC AGCCTTTGAA
CATACTAAAA AAATCACCCT TAAAAAGGGC GAGAAAACCA CTCTTAACTA TGCTGTGAAG
GCCTTAGCAC ATGAAGGCAA AGCAAGATTT TCACTCAATG TCTCGGGTAC AAAATTACTT
GAAGATGTTA ATCGAAATTG GTCTCTAGGT TTGCGGCCCG CTTATCCGGC AACGTTAACT
CGCAGTCAGA AAATTCTTCA ACAAGGTGAT AGCCTGCGTC TTGACCCAAG TATTGCTCAA
GCGTTATTTC CTGAGACTGT GCATGCCTCT TTAACTATAT CGCCTAAAGC AAACATTGAT
CTTCAGGCGC AACTGACTCA CTTATTACAA TATCCTTATG GTTGTTTAGA GCAAACCAGT
AGTCGTGCTT ATCCATTGCT TTTTGCCACG CCAGGCAAAC AGAAAAGTAT GGGGATTAAA
GCGGTTAGTG AAGATAAACG GTTAGATATG ATCAATAAAG GCATCGAAAG ATTAGCGATG
TTACAGCTGA GTAATGGTGG TTATGGTTTA TGGAATAATA CCTCTGCAGA AGAGCACTGG
TTAACTGCTT ATGTTGCTGA CTTTTTATTA AATGCCCGTG ATATGGGCAT AGCTGTACCT
GAAGAAATGT TAGCTAAAAC TTTAACGCGT TTGCAAAATT ACTTAGCGCG CACCCGACCG
TTTTATAACG AACGTTGGAG TGATGATGGT AAACACTATT ACTTCGCTTA CAAAGCTTAT
GCCGCTTATG TACTCTCTCG GGTGAATCAA GCGCCACTTG GCACCTTACG TAACTTGGCT
AAAAACCATA GTGCTAACGC CAAAACTGGG TTGTCGCAAA CACATCTTGC ATTGGCATTA
TTTAACATGG GTGATAAAAA ACGTGGTGAG CAATTAATGG CTATCGCGTT AAATAATCTA
CCGAATAAAC GACAACAATA TCTTGCTGAT TATGGCAGCC AAATACGTGA CTTAGCACTA
ATGATCCACT TAATGTTAAA GGAGGATAAA GCTAAAGAAG AAGCTATCGC CCTTAGTTTT
ACCTTGGCTG AAGAGGTTAA TTTACGTCAG TACTTGAGTA CGCAAGAACG TAATGCTTTG
TTCTTAGCCG GTTTATCACT GCAGGCGTTT GAAGGAAAAC CTTGGTCTGC CAACGTTATT
CTTGGCGCGG CTAACAATAA ACTTAGCCAA ACCTCGGTTT ATCAGCAAGG TTTGTCGAGC
GAGGTACTGC AACAAGAAGT AACTATCACT TCTGACAATA AACATCCGCT GTTAGCAAAT
ATTAGCGTCA GTGGTTACGG TAAAAAAGCC CCGAAAGAAA GTGCCAATGG TTTGTCGATT
CAAAGACAGT GGTTAAGCGT AAAAGGTAAA GAAACCAGTA TTGATCAAGT CAAAGTCGGT
CAGCTATTCT TGGTTCACCT GCAAGTCTCT GCTAAGCAGC GAACACCTGA TGCCCTAGTG
GTTGATTTGT TACCTGCGGG TTTTGAATTG GAAAATCAAA ATCTCGGTAA TTCGATAAAA
CTAGATGAGC TTAAAGTTGA TGGGAAAACG ATTGAATATT GGCAAAAAAA TACGCCGATA
ACTTATCAAG AATATCGCGA TGATCGTTTT GTTGCAGCAC TTAACATTAG CAAACGTCGC
ACTGCGCATT TGTTTTACTT AGTGCGCGCG GTGACTCCCG GTGTTTACAA GGTACCAGCA
TCTTTAGTTG AAGATATGTA TCGACCAGAG CTTAGAGGCA TTGGTGCTAC TATTGGCGAT
ATAAGTATTA GTCAATAA
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| Protein sequence | MKTNFISPIF LWTLLLLANM MLFGCGEQNS KPVKEGSDVK VSVDAEVSAK QTIASGEPNE
SSFNLQQVQK DYGETPLSVL DVSERSKDGR NSVAITLSVP LDPSKNHQQY FNISAADKGA
IDGAWVISKS GKTIWFPYVD PDTSFDVTIY QGLVAANGKV LSKTINKKVK TSSITASINF
DTTGAFLTQG LGNGLPVVSV NIDAVDLNFY QVNDKDRQHF LQEMSYKNYR WDMKRITQFS
ELVYSGRYDL DQPKNTRVKR SINIEGIAQL SEPGIYLAVM TQAGAYDNHQ VMWFSVTDIG
LHARFYNKQL DVYASSLKTG KAIGNVAVTL VNDKGNILQQ GVTSPSGEAS FASDLTAASL
IIAQNEQHFS IIELNKPALD LSDFDLGLRP YRAQELFIYA PRNLYRPAEF VDFNALLRSD
DGKLTVKSIL SAAIKSPDGS KIKTFKWQGD EQGFYHYQWQ IPKSAALGNW QLEVVNVNRE
SFTYDFKVEE FLPERLKITF NAKAPQERLL ATKKQHIKLP ILGEYLFGAP ASGNRLSTQV
NTTQWRNPVE TLPKFEFGDI RQTRFNNRTE LKDIELDAKG QAIISYQGDW SGLHSPLKVN
FISSLFESGG RPVTRAYSAL VWPSDKMLGI RSSFGEDNPA ANSTVIFDIV KASLDGTKHS
ANALDIKLIR EDRRYFWVYS QNRGWHYEWN DNEFVELTSS LTIKDGVTAS VDFPVTWGRY
RLEVRDVNSG LLSSVQFYAG TNWYADWKKS QSGSGAARPD KVTMALDKAS YAAGDLVKVN
IVPPQAGEAI ILVEGNSPLW STRQFIPAEG AIIEIPVSAD WQQHNIYISA LVLQPGDKLK
TITPKRSFGL VHLPLQRESQ QLNIEFEVAE KALPNKILPV QIKVTNEVGH QVGQNTEAAP
IAEKVFVTLA AVDVGVLSIS EFKTPDPFEA FFGQRRYEVD SRDVYSKVIE VNQAENARLR
FGGDSDLTRG GKEPQSDVQI VSLFSGLVSL DEQGEAIIPL DIPDFNGRIR LMALSFSADK
FGHNDKEVTI AAPVVTQLAM PRFLAMGDET TLALDVTNLS GEQQQLTVQL SSSGPVAAFE
HTKKITLKKG EKTTLNYAVK ALAHEGKARF SLNVSGTKLL EDVNRNWSLG LRPAYPATLT
RSQKILQQGD SLRLDPSIAQ ALFPETVHAS LTISPKANID LQAQLTHLLQ YPYGCLEQTS
SRAYPLLFAT PGKQKSMGIK AVSEDKRLDM INKGIERLAM LQLSNGGYGL WNNTSAEEHW
LTAYVADFLL NARDMGIAVP EEMLAKTLTR LQNYLARTRP FYNERWSDDG KHYYFAYKAY
AAYVLSRVNQ APLGTLRNLA KNHSANAKTG LSQTHLALAL FNMGDKKRGE QLMAIALNNL
PNKRQQYLAD YGSQIRDLAL MIHLMLKEDK AKEEAIALSF TLAEEVNLRQ YLSTQERNAL
FLAGLSLQAF EGKPWSANVI LGAANNKLSQ TSVYQQGLSS EVLQQEVTIT SDNKHPLLAN
ISVSGYGKKA PKESANGLSI QRQWLSVKGK ETSIDQVKVG QLFLVHLQVS AKQRTPDALV
VDLLPAGFEL ENQNLGNSIK LDELKVDGKT IEYWQKNTPI TYQEYRDDRF VAALNISKRR
TAHLFYLVRA VTPGVYKVPA SLVEDMYRPE LRGIGATIGD ISISQ
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