| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3961 |
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| Symbol | |
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| ID | 3519104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4149641 |
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| End bp | 4152148 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286407 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_270619 |
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| Protein GI | 71278302 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATTA CATTTAAAAA ATCTGCGGTT TATTGTGCAA CATTGGCAGC ACTTGCAATA
GGCTCTTCAG CAATGGCTGA AGAAGTAAAA AAAGAAGCAG GCAAACCAGC AGTTGCAGAT
TTAGAACGCA TTGTAGTAAC GGGTAATACG GGCCGTGGCC AAACTATTCT AGAATCATCA
ATATCAGTCA CTTCTTTAGG TCCAGAGCAA CTTGCCAGAG AAATGCCTTT AGGTACTGCT
GATTTATTAG AATCAGTACC TGGTTTTTGG GTAGAAGATT CAGGCGGCGA AACGAATAAT
AACGTAGCAC CTCGTGGTTT ACGTGGTGGT GAAGGGTTTC GCTATATTGG TGTCGAAGAA
GATGGCTTAC CGGTTGTATA TGATGGCGTA TGGGTTGATT TTTATCAGCG TCAAGATATT
ACCATTGAAC GAATGGAAGC AGTACGTGGC GGAACAAGTG GATTACTTAC CACCAATGGT
CCCGCCGCAT TAGTTAACTT TATTACCCGT AAACCTAGCG ATGAAGCTGA AGGTACAGTT
AAGTTATCAT ATGCAGATTA TGGTATGACT CGTCTTGAAG GTTTTTATGG GGCTCCAATC
AGCGAAGACT GGAAAATGTC AGTGGGTGGT TTTTACCGCC AATCAGATGG TGTGCGTGAT
ACGGAATTTA CTGCTGATCA AGGTGGTCAA ATTCGTGCCA ATTTAGTCCG TGAGTTTGAT
AATGGTCAAT TGACTATTTC AGCAAAACAT CTTGATGACC ACACCACTTT TTATGTGCCT
ATTCCATTGC AAAACCAAGC CGACCCTCAA GGCATACCAG GAGTTGATCC TCAATCAGGT
ACGCTTATTG GTAAAGATCA GCAAAACCTT GGTTATTTAA AACAAGATGG TAGTTATTTA
AACCGAGATC TTGAAGATGG CCAGCACACT AAAGTGACTA CTTTAGGTTT TGAGTTTGAT
TATGACCTAT CTGATAACTG GTATATGAAT GCAAAAGCTC GTTACTCTAA GTTAGAAAAT
GATATGTATA TCTTACTCAA CTTTGATAAC TCAACTCTGG TTGATGGCAA TGCGCGCTTA
CAAGCTGATG ATGTTCAAAA TATGCTAACT CATTTTGCTG ATGACGGTGC AGTAAGTGCA
GCTTATCAAT TTGTGAACTC AGGTGAAATA TTTAACGATG CCAGTAGCCT TAACGGTAAT
GGCTTAGTTA CAACAAGTTA CCCACTTTAC TCGCGTTATG AAGCTGACCA ACTAGTGACT
AAACTAAGTT TTACTTACGA AAATGATGCT CACAGTTTAA CCTTCGGTTG GTTATATGCT
GGTGTTGATG CCGATGATTT GCCTGTAGAT AAGTGGGAGT CACAATTTTT AACCGAGGTG
AGAGACAATG CACGTCGTTT AGATATTGTT GCGCTTGACT CACAAGGTGG TGTTATTGGT
CAACTTACCG ATAAAGGCTC TACAGGATAT GCGCCAGGTT GGGGTCAAGC AACTGCTTAT
GGCACCACAA GCTCGCACTC ACTTTTCGTT AATGAAGAAT TTCAAGTTAC CGATGATTTA
AGACTCGATG GTGGTATTAG GGTTGAGCGT TTAAGTTTAA ATAGTACTGG TTCAGGCACT
TCATTTGCAC AAGAAGTTGA TGGCGCTTTT GATGCTAATG GCAATGATAC TGATAACATT
ATGGCAAACA ACTATACGGA TATGCCTTCT AATGTTTTCT TCAATAAAAA AATGGATGTT
ACTGAAACGG CATGGACATT AGGTTTTAAT TATACCTTTA ATGAAAATAT TGCCATGTTC
GGTCGTTATG CTGATGCGTT TGAAATGCCA CGTTTACTTA GCCATGGTCA AGGTATTCAC
TCAGGCGAAG ATGCACAGTT TAATGAAACG GTAAACCTTA CTTTCGGTGA AATAGGTGTT
CGTTATTCAG GAGATACTAT TGGTACTTCC GTGACCTTAT TTAATACTAA TTTTCAAGAC
TTAACTGAGC GTAACTTTAC CGGTAGTAAC GGTGAAGTGT CTAACCAAAC GGTTGATGCA
ATTACTACAG GTATTGAATT CGAGGCCGTT TGGCGGCCAG TTGAGAGCAT CTCAATAGAG
CTGACTGGTG TAGTACAAGA CCCTAAAATG GAAGGCTTTG AAGGTGATTT CAGTCATTGG
GAAGGCAATC AAGTTAAGCG TACGCCTAAG ATACAAATGC GCGTAACGCC GACTTATCAT
TTCGACGAAG GTAATGTGTA CTTAACAATT CATCATTTAG GGGAACGTTT CTCTGATGGT
CAAAATGAAT TCGCTTTACC TGCATATACC ACCGTAGATG CAGGTGTTAT GTACCACTTC
AATCAAGGGT TAAGTATTCA CTTAAAAGCA ACTAACCTAT CAGATGAAAT TGGTTTGACG
GAAGGTAATC CTCGTGCAAT TAATGACCAA CAAGCTGGCT TTGAATATTA CTATGCTCGT
CCAATCTTAG GTCGAACGTT CACAGCTTCA TTAACCTACG ATTTTTAA
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| Protein sequence | MTITFKKSAV YCATLAALAI GSSAMAEEVK KEAGKPAVAD LERIVVTGNT GRGQTILESS
ISVTSLGPEQ LAREMPLGTA DLLESVPGFW VEDSGGETNN NVAPRGLRGG EGFRYIGVEE
DGLPVVYDGV WVDFYQRQDI TIERMEAVRG GTSGLLTTNG PAALVNFITR KPSDEAEGTV
KLSYADYGMT RLEGFYGAPI SEDWKMSVGG FYRQSDGVRD TEFTADQGGQ IRANLVREFD
NGQLTISAKH LDDHTTFYVP IPLQNQADPQ GIPGVDPQSG TLIGKDQQNL GYLKQDGSYL
NRDLEDGQHT KVTTLGFEFD YDLSDNWYMN AKARYSKLEN DMYILLNFDN STLVDGNARL
QADDVQNMLT HFADDGAVSA AYQFVNSGEI FNDASSLNGN GLVTTSYPLY SRYEADQLVT
KLSFTYENDA HSLTFGWLYA GVDADDLPVD KWESQFLTEV RDNARRLDIV ALDSQGGVIG
QLTDKGSTGY APGWGQATAY GTTSSHSLFV NEEFQVTDDL RLDGGIRVER LSLNSTGSGT
SFAQEVDGAF DANGNDTDNI MANNYTDMPS NVFFNKKMDV TETAWTLGFN YTFNENIAMF
GRYADAFEMP RLLSHGQGIH SGEDAQFNET VNLTFGEIGV RYSGDTIGTS VTLFNTNFQD
LTERNFTGSN GEVSNQTVDA ITTGIEFEAV WRPVESISIE LTGVVQDPKM EGFEGDFSHW
EGNQVKRTPK IQMRVTPTYH FDEGNVYLTI HHLGERFSDG QNEFALPAYT TVDAGVMYHF
NQGLSIHLKA TNLSDEIGLT EGNPRAINDQ QAGFEYYYAR PILGRTFTAS LTYDF
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