| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3960 |
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| Symbol | nagZ1 |
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| ID | 3519477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4147119 |
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| End bp | 4149449 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286406 |
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| Product | beta-hexosaminidase |
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| Protein accession | YP_270618 |
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| Protein GI | 71278168 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAATAT CACTTTTTTT ATTATTGCTT ACTTTATCTG CGTCACCCTT TACCTCTGGC
GCACAAAAAA GTGCACAGCA AAACGCGCTA TTCCCATATC CTCAACAAGT GAGTTGGGGA
AAAGAAACCT TTACCTTTAA TAATGAAACT CAATTAATTT ATACCAATAA TGACGCTAAA
AAAGTTGCTC ATTATTTTAG TGACTTCATA CAACCAGCCA CAGGATATTT GCCATCATTG
TTGACTACAG AAGAAGCTAG GTTACAGTAT AAATTGGCTA ATTCGGCTAA TAAAATAGCG
TTCTTACTGC TGGAAAAATC AAGTGAAGAA GCTGTTGAAG GTAGTTATCA TTTAACCATT
GATGCCAACA AAGTCACGGC TAGTGCCAGT AGCGAAGTTG GTTTATTCTA CGCTGCGCAG
ACCTTAAGGC AGTTATTCTC AAGTGATATA GAAAGCCGTA TGCCAATTAA TAAAGCGCAA
TGGCTATTAC CTAGTGTTGA TATTATTGAT GCACCACGTT TCAAACATCG CGGTATGCAC
TTAGATGTAA GCCGTCATTT TTTTGATGTT ACCTTTGTAA AACGTTATAT CGACTGGCTA
GCATTTCATA AAATTAACTA TTTTCAATGG CACCTCACCG ATGATCAAGG TTGGCGTATT
GAAATTAAGC AGTTTCCTAA ATTAACTTCG GTGGGCGGGC ATCGCGCACA AACGGTTGTC
GGTCACACTT ACGATTATCA ATCAGTGTTT GATAATAAAT CCCATGGTGG TTTTTATACT
CAGGCACAAA TTAAAGAGGT ATTGGCTTAT GCTAAAGAAC TTCATGTTGA GGTGATTCCA
GAAGTGGGTG TACCGGGGCA TAGCACTGCA TTTTTAGCGG CTTACCCAGA ATATTCTTGC
CATAAAAATC TGGTTAAGGT TGAGCAACGC TTTGGTATAT TTGAAGAAGT ACTTTGCCCT
ACTGAGGATA CTTTTACTAT GCTTGCTAAA GTTTACCAAG AAGTTGCGAC TCTGTTCCCA
TCAAAATATA TTCATATTGG TGGTGATGAG GTGATTAAAA AACAGTGGCT TGAAAGTGAC
TTTGTACAAC AGTTGATGAA AGAGCAGGGC TTAACCAATG GAGAAGAGGT ACAAAGTTAC
TTTATTAAAC GTGTTAGTCA AATCATCACC GGCTTAGATA AAACTCTTAT TGGCTGGGAT
GAAATCATTG AAGGTGGTAT TGCCAAAGAC GCTGTGATTA TGTCGTGGCG CGGTATTGAA
GGAGGTATTG CTTCAAGTGA AGCTGGACAT GATGTAATAA TGAGCCCTTA CCAATATACT
TATTTAGATG CTTATCAATC GCGTTCAGTT GATGAACCTA AAGCCATTCA TGGTTACTTA
CCCCTTAAAA TGGTTTATGG ATACGACCCA GTACCGGCAG ATTTATCACC ACAGCATCAA
CAACATATTC TAGGTGCACA AGGGGCATTA TGGACAGAGT ACATTGAGAG TCCCCGCCAT
GCGGAGTACA TGTTATTACC AAGGTTAAGT GCTTTAGCTG AAGTATTTTG GACACAACCG
ACAAATAAAA ACTGGTCTCG TTATAGTGCT AATGTTGATC ATATTATTAC GCGATATCAG
AAAATGGGGC TTAACCCAAG CACCAGTGCT TTTACCGCAA GCACTAAGAT TGACGTTGTA
AAAAGTGGTG AATTAACCGT AAACTTAACA GCCGATATTG CGGGGAAGAA TATATTCTAT
ACTATTGATG GTAGTGAACC CGCCCCCTAC AGTAAAGCAA CCTATTTATA TAAGAATGCC
ATCACAGTAA CGCAGCCAGT GTTAATACGG GTGGCTGTCG AATCAGCCCA GGGAAGAACG
CTTTTTAGTG AAGTGAATGT GGCGTTAGCG CCGCATAAAG CTTTAGGTAA AAAAATCAGT
TTTGCTGCAC CTCCAAAAAC GGGTGAAGAA CGTTTATTAG ATGGCATTAT GGCTTACCAG
CAGTATTACA ATGTTGATGA TTTTGCGGTG TTTTACGATG AGGATCTAGA TGCGATTATT
GATTTTGAGC AGGCCACTGA GTTCAGTCAA GTGCAACTGG GCATTGATAC CGGTAAACAC
AGGCAGTTGC AGCCTCCTGT GTCAGTTGAA GTGTTAGTTT CGAATGACGG CATTAATTGG
CAATCATTAT TACGTTTAAC GCCAACTCAA ATTAAAGGGC CGTTATTAAC CTTAGACTTT
GAGCAAGTAA AAATGCAATT TCTTCGTGTT ATTGCTATTA ATGCTAAGAA CTCTACTGAT
CCACAAATAC CAAAACTTCC TTTATATATC GATGAGATTG CAGTCTATTA G
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| Protein sequence | MKISLFLLLL TLSASPFTSG AQKSAQQNAL FPYPQQVSWG KETFTFNNET QLIYTNNDAK
KVAHYFSDFI QPATGYLPSL LTTEEARLQY KLANSANKIA FLLLEKSSEE AVEGSYHLTI
DANKVTASAS SEVGLFYAAQ TLRQLFSSDI ESRMPINKAQ WLLPSVDIID APRFKHRGMH
LDVSRHFFDV TFVKRYIDWL AFHKINYFQW HLTDDQGWRI EIKQFPKLTS VGGHRAQTVV
GHTYDYQSVF DNKSHGGFYT QAQIKEVLAY AKELHVEVIP EVGVPGHSTA FLAAYPEYSC
HKNLVKVEQR FGIFEEVLCP TEDTFTMLAK VYQEVATLFP SKYIHIGGDE VIKKQWLESD
FVQQLMKEQG LTNGEEVQSY FIKRVSQIIT GLDKTLIGWD EIIEGGIAKD AVIMSWRGIE
GGIASSEAGH DVIMSPYQYT YLDAYQSRSV DEPKAIHGYL PLKMVYGYDP VPADLSPQHQ
QHILGAQGAL WTEYIESPRH AEYMLLPRLS ALAEVFWTQP TNKNWSRYSA NVDHIITRYQ
KMGLNPSTSA FTASTKIDVV KSGELTVNLT ADIAGKNIFY TIDGSEPAPY SKATYLYKNA
ITVTQPVLIR VAVESAQGRT LFSEVNVALA PHKALGKKIS FAAPPKTGEE RLLDGIMAYQ
QYYNVDDFAV FYDEDLDAII DFEQATEFSQ VQLGIDTGKH RQLQPPVSVE VLVSNDGINW
QSLLRLTPTQ IKGPLLTLDF EQVKMQFLRV IAINAKNSTD PQIPKLPLYI DEIAVY
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