Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3953 |
Symbol | tyrA |
ID | 3522096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4136781 |
End bp | 4137926 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637286399 |
Product | bifunctional chorismate mutase/prephenate dehydrogenase |
Protein accession | YP_270611 |
Protein GI | 71281624 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0287] Prephenate dehydrogenase [COG1605] Chorismate mutase |
TIGRFAM ID | [TIGR01799] chorismate mutase domain of T-protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATT CAGATCCCGA TTTTGATAAA AAGTTAACAA GTTTACGTGA CGAAATTGAT GAAATTGATA GTGATTTAGT CAAATTATTG CAAAGACGCC TTGCTGTTAC CAGTAAAGTT GGTCAACTAA AAAGTGGTGT TGGCAGACCC ATTTATGATG CTAAACGCGA GGCGAGTTTA TTTGCTAAAC GTCGCCAGCA GGCAAGTGAG GCTGGTCTAT CACCTGACTT AATTGAAGAT GTTTTACGCC GTTTAATGCG TGACTCTTAT GTCAGTCAAG ATGCTAGTGG TTATCGCTGC GTTAACCCAG AATGTAAAAA GGTTGTGGTA GTGGGCGGTA AAGGGCAATT AGGCTCTGTT TTTGTCGACC TTTTTCAACG TTCTGATTAC CAAGTTGCTA TTATTGAGCA AAATGATTGG CCCAACAGTG AAGCTATTTT AGCTGATGCG AGCTTAGTCA TTGTTGCTGT GCCTATTCGC CTGACGACTA TGGTTATTAA TCATCTTAAT AACTTACCAA AAGAGTGTAT TCTTGCCGAT TTAACCAGTA TTAAAGAGTC GCCTTTGTTT GAAATGAAAA AGGTACATGC TGGTCCTGTT GTTGGCTTAC ACCCTATGTT TGGTCCAGAT GTCACAGGCT TAATTAAACA AACCATTATT AGTTGTGAAG GGCGTAACCC TGAACAATAT CAATGGCTCA TTGAGCAGTT TGAAGTGTGG GGCGCTAAAA TTTATCCGGT GCAAGCGCAT GAACATGACC AAGCGATGTC AATGGTACAA GTTATGCGAC ATTTCTCTAC TATCGCTTAC GGCTATCACT TGATGAGTGA AGGGGCTGAT ATTGAGAACC TAGTAGCGAT GAGTTCACCT ATCTATCGAT TAGAGTTGAT TATGGTAGGG CGATTATTTG CTCAAGATCC TACCCTTTAT GCGGATATTA TTTTTGCTAA CAAAGATAAT GTCAGCATGA TGAAACGCTT TGCTTACCGA TTTTTAGAAC TACTTGAAGA TGTCAGCCTT GATGATAAAG ATGCCTTTGT TGATATGTTT AATAATGTTT CGGGTTGGTT TGGTGATTAT GCCGGAGATT TTCTCGAAGA AAGTAAATCG ATGTTATTAA AAGCTAATGA GCTGAAAAAA CATTAA
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Protein sequence | MKNSDPDFDK KLTSLRDEID EIDSDLVKLL QRRLAVTSKV GQLKSGVGRP IYDAKREASL FAKRRQQASE AGLSPDLIED VLRRLMRDSY VSQDASGYRC VNPECKKVVV VGGKGQLGSV FVDLFQRSDY QVAIIEQNDW PNSEAILADA SLVIVAVPIR LTTMVINHLN NLPKECILAD LTSIKESPLF EMKKVHAGPV VGLHPMFGPD VTGLIKQTII SCEGRNPEQY QWLIEQFEVW GAKIYPVQAH EHDQAMSMVQ VMRHFSTIAY GYHLMSEGAD IENLVAMSSP IYRLELIMVG RLFAQDPTLY ADIIFANKDN VSMMKRFAYR FLELLEDVSL DDKDAFVDMF NNVSGWFGDY AGDFLEESKS MLLKANELKK H
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