Gene CPS_3953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3953 
SymboltyrA 
ID3522096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4136781 
End bp4137926 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content39% 
IMG OID637286399 
Productbifunctional chorismate mutase/prephenate dehydrogenase 
Protein accessionYP_270611 
Protein GI71281624 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase
[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01799] chorismate mutase domain of T-protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT CAGATCCCGA TTTTGATAAA AAGTTAACAA GTTTACGTGA CGAAATTGAT 
GAAATTGATA GTGATTTAGT CAAATTATTG CAAAGACGCC TTGCTGTTAC CAGTAAAGTT
GGTCAACTAA AAAGTGGTGT TGGCAGACCC ATTTATGATG CTAAACGCGA GGCGAGTTTA
TTTGCTAAAC GTCGCCAGCA GGCAAGTGAG GCTGGTCTAT CACCTGACTT AATTGAAGAT
GTTTTACGCC GTTTAATGCG TGACTCTTAT GTCAGTCAAG ATGCTAGTGG TTATCGCTGC
GTTAACCCAG AATGTAAAAA GGTTGTGGTA GTGGGCGGTA AAGGGCAATT AGGCTCTGTT
TTTGTCGACC TTTTTCAACG TTCTGATTAC CAAGTTGCTA TTATTGAGCA AAATGATTGG
CCCAACAGTG AAGCTATTTT AGCTGATGCG AGCTTAGTCA TTGTTGCTGT GCCTATTCGC
CTGACGACTA TGGTTATTAA TCATCTTAAT AACTTACCAA AAGAGTGTAT TCTTGCCGAT
TTAACCAGTA TTAAAGAGTC GCCTTTGTTT GAAATGAAAA AGGTACATGC TGGTCCTGTT
GTTGGCTTAC ACCCTATGTT TGGTCCAGAT GTCACAGGCT TAATTAAACA AACCATTATT
AGTTGTGAAG GGCGTAACCC TGAACAATAT CAATGGCTCA TTGAGCAGTT TGAAGTGTGG
GGCGCTAAAA TTTATCCGGT GCAAGCGCAT GAACATGACC AAGCGATGTC AATGGTACAA
GTTATGCGAC ATTTCTCTAC TATCGCTTAC GGCTATCACT TGATGAGTGA AGGGGCTGAT
ATTGAGAACC TAGTAGCGAT GAGTTCACCT ATCTATCGAT TAGAGTTGAT TATGGTAGGG
CGATTATTTG CTCAAGATCC TACCCTTTAT GCGGATATTA TTTTTGCTAA CAAAGATAAT
GTCAGCATGA TGAAACGCTT TGCTTACCGA TTTTTAGAAC TACTTGAAGA TGTCAGCCTT
GATGATAAAG ATGCCTTTGT TGATATGTTT AATAATGTTT CGGGTTGGTT TGGTGATTAT
GCCGGAGATT TTCTCGAAGA AAGTAAATCG ATGTTATTAA AAGCTAATGA GCTGAAAAAA
CATTAA
 
Protein sequence
MKNSDPDFDK KLTSLRDEID EIDSDLVKLL QRRLAVTSKV GQLKSGVGRP IYDAKREASL 
FAKRRQQASE AGLSPDLIED VLRRLMRDSY VSQDASGYRC VNPECKKVVV VGGKGQLGSV
FVDLFQRSDY QVAIIEQNDW PNSEAILADA SLVIVAVPIR LTTMVINHLN NLPKECILAD
LTSIKESPLF EMKKVHAGPV VGLHPMFGPD VTGLIKQTII SCEGRNPEQY QWLIEQFEVW
GAKIYPVQAH EHDQAMSMVQ VMRHFSTIAY GYHLMSEGAD IENLVAMSSP IYRLELIMVG
RLFAQDPTLY ADIIFANKDN VSMMKRFAYR FLELLEDVSL DDKDAFVDMF NNVSGWFGDY
AGDFLEESKS MLLKANELKK H