Gene CPS_3930 details

Gene Information

• Locus tag: CPS_3930
• ID: 3521545
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 4111342
• End bp: 4111896
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637286376
• Product: cytochrome b561 family protein
• Protein accession: YP_270588
• Protein GI: 71281076
• COG category: [C] Energy production and conversion
• COG ID: [COG3038] Cytochrome B561

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.698888
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTTGGA AAAACACTCA AAATCACTAT GGTTCGATTT CAATTAAAAT GCACTGGTTA 
ATGGTGGTTT TAATGATTTT TGTTTTTGCC AGTATTGAAG GCAGAGTGTT TTTTGAAAAA 
GGTACCGAGC TACGAGATCT CTTCAAGATG TGGCATTTCA TGCTTGGTTT ATCGGTATTT 
ATTTTAGTCT GTGCGCGCCT CTATTTACGC AGTGTACAAG TTATTCCCCA AATAACCCCG 
CCACTTTCAG TTATTCAAGC TAGGGGCGCC CATATGGCGC ACTTGGTGCT TTATGTTTTC 
ATGATTGCCA TGCCAATTTT TGGTTGGTTT GTGCTCAGTG CAAAAGGCAA AGTCATTCCC 
TTTTTCGGAT TAGAGTTACC CGCTCTTATT CCCTATGACA AACCTTTTGG CAAAGTATTA 
GAAGGCTGGC ACAAAGAAAT TGGCTCATGG GGTTATTATC TGATTGCCTT TCATGCAGTA 
GCAGCGTTAG TGCATCATTA CATTCAAAAA GATGACACGC TAACACGTAT GTTACCGGTA 
AAGAAAAACC ACTAA 

 

Protein sequence

MTWKNTQNHY GSISIKMHWL MVVLMIFVFA SIEGRVFFEK GTELRDLFKM WHFMLGLSVF 
ILVCARLYLR SVQVIPQITP PLSVIQARGA HMAHLVLYVF MIAMPIFGWF VLSAKGKVIP 
FFGLELPALI PYDKPFGKVL EGWHKEIGSW GYYLIAFHAV AALVHHYIQK DDTLTRMLPV 
KKNH