Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3925 |
Symbol | |
ID | 3521248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4101646 |
End bp | 4103670 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637286371 |
Product | methyl-accepting chemotaxis protein |
Protein accession | YP_270583 |
Protein GI | 71280779 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.903723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAAAT TTAAAAAAAT TAATCACAAG CTTGTTTTTA CATTTCTATC TCTTTCTTTA ACACCACTCA TTATTTTTGC CTATATCAGT ATCAATATGG CAAGCGACTC CATACAGGCA CAAGCATTTA GTCAATTAGA ATCTGTACGT TCGATTAAAA AAGCACAAAT ATCTAACTAC CTCTCATCAT TAAAAGCCAG TTTACAGGTA TTAAATGATG ATCCTTATGC ATCCGAAGCG TTCAATGCCT TTGATCAAGC AATAACTTCT GCTGGTTTAG ATAGTAATGC ATGGCGACAA GCAGAAAATA AATATGCTGA TCGTTTTATA AAAATTAATA AAGTGAATGC TTGGTATGAT CTCTTTTTTA TCAATTTACA AGGTGACATT GTATTTACCG CCGCAAAAGA GTCTGATTTA GGTATTAATA TTCCTCAATC TCACATTAAC CAAACTAGTC TAGGCGATGT ATTTCAAAAA ACACAACAAA ATGGCGTAAC TGAAATATCA GTTACCGACT TCAAACCTTA CCCACCATCC AACGATGAGC CCGCTGCGTT TATGATGACA AAGCTAATTA ACTTAAGTGG AAAGCACATA GGTTATATTG CTCTACAGTT CCCTTTAAAT AAAGTTAATG AAATCATGCA GCAACGTGAT GGCATGGGCG ATACCGGAGA AACATACCTC GTAGGTGAAG ACCAGAGAAT GCGTTCAGAC TCTTATTTAG ATCCCAAAGG ACATTCAGTT ATTGCATCTT TTGCTGGTGA TATTAGTAAT AATGGAGTGA ATACCGATGC GGTAAAATCG GCATTTAACG GTGAGACTGC AAGCCGTATT ATTATTGATT ACAACGGTAA CAGCGTACTA TCTTCGTTTA CCACGGTAGA TTTGGGAGAC TTTAAATGGG CACTTATTGC AGAAATTGAT GAAGCAGAAG CTTTTGAAAC GTCCAATAAT CTTATTAATA TATCAACAGG CATTGTCGCC GCAGTATCGG TCGTTATTGG GTTTATAGCA ATTTTAATTG CTAAAAACAT CAGTGGCCCT ATCGTGCAGG CGGTTGCTAT AGCACAACGA GTCTCGTCAG GTGATTTGAC GGCAAAGATA GTCGTTAATC AAAGTGATGA GTTAGGCTTA TTGCAACAGG CGATGCACGA CATGATAGCT AAGTTGAAGG ATATGATTGA ACATATTTCG AGTTCTGCCG ATCAGCAAGC CACTGCTTCT CAAGAACTAT CCAGCATTAC CGAGTTAACC AATACAAATG TATCTCGACA ACACCAAGCA ACAGAGCAAG TTGCTACCGC AATAAATGAG ATGAGTGTTT CAATTGACGA AGTAACACAA AATACTGCTG AAGCGTCAAA TGCAGCAGAT ACTTCAACCA AACTAGTCAA GATTAGCTCT ATTGCAGTCA ATCAAACCAT AGACCAAATC CTCCAATTAT CAGATGACAT CACTAAATCT AAAGTTTTAA TTGATGACGT TCAAGCGGGA ACCAAAGATA TCGCGAATAT TTTGGTCACC ATTAAAGGCA TTGCCGATCA AACAAATTTG CTCGCACTAA ATGCAGCAAT AGAAGCAGCG AGAGCAGGAG ATCAAGGTCG GGGTTTTGCA GTAGTCGCTG ATGAAGTGAG GAATTTAGCA CAAAATACAC AAAATTCGAC GGTAGAAATC GAAAAAATGA TTAAGTCATT AGAGTTAAAT GTAAGTGCTG CAACAAACTC TATGGTTGCA GGTACAACAC AAGCCCAGCT CATCGTTGAT AAAACGAATG AAGTAACACA GTCATTAACC GAAGTTGAGT CATCTGTAGC AATGATCTCT GATATGAATA TTCAAATATC TACTGCCACA CAACAACAAA GCTCAGTTGC GCGAGATATA AACCAACAAG CAACAGAGAT AAGCAACATT TCAATTGAAA CGGGTGAAAG TACTAAAGAA ATATCTTCTG CGAGTGACGA ATTGGCGGCT TTAGCAGTAG AACTGACGAA TCAAGTTCAA GCATTTAAAA TATAA
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Protein sequence | MLKFKKINHK LVFTFLSLSL TPLIIFAYIS INMASDSIQA QAFSQLESVR SIKKAQISNY LSSLKASLQV LNDDPYASEA FNAFDQAITS AGLDSNAWRQ AENKYADRFI KINKVNAWYD LFFINLQGDI VFTAAKESDL GINIPQSHIN QTSLGDVFQK TQQNGVTEIS VTDFKPYPPS NDEPAAFMMT KLINLSGKHI GYIALQFPLN KVNEIMQQRD GMGDTGETYL VGEDQRMRSD SYLDPKGHSV IASFAGDISN NGVNTDAVKS AFNGETASRI IIDYNGNSVL SSFTTVDLGD FKWALIAEID EAEAFETSNN LINISTGIVA AVSVVIGFIA ILIAKNISGP IVQAVAIAQR VSSGDLTAKI VVNQSDELGL LQQAMHDMIA KLKDMIEHIS SSADQQATAS QELSSITELT NTNVSRQHQA TEQVATAINE MSVSIDEVTQ NTAEASNAAD TSTKLVKISS IAVNQTIDQI LQLSDDITKS KVLIDDVQAG TKDIANILVT IKGIADQTNL LALNAAIEAA RAGDQGRGFA VVADEVRNLA QNTQNSTVEI EKMIKSLELN VSAATNSMVA GTTQAQLIVD KTNEVTQSLT EVESSVAMIS DMNIQISTAT QQQSSVARDI NQQATEISNI SIETGESTKE ISSASDELAA LAVELTNQVQ AFKI
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