| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3803 |
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| Symbol | truA |
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| ID | 3520629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3965207 |
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| End bp | 3965986 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286250 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_270466 |
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| Protein GI | 71280165 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTTATG CGTTAGGCAT TGAGTATGAT GGTAAAAACT ATTGTGGCTG GCAACGCCAA
AATAATGTTA TCACTGTACA AGAAAAGTTA GAAAAAGCAT TATCTAAAAT TGCGGATGAA
AAAATTGAAG TGGTTTGTGC CGGGAGAACC GATACAGGGG TTAATGCAAC CAATCAAGTG
ATCCACTTTG ACACCGAAAA AAAACGCAAA GATACCGCTT GGACGTTAGG CGTAAACACT
CACTTACCTT CTGATGTAGC TGTTGCTTGG GTAAAGAAAG TTGATGATGA CTTTCATGCT
CGCTTTAGTG CCACAGCTAG AAATTATCGT TATATTATTT ACAATAAACC CCTTCGTTCA
GCAATATTGA GTCATGGTAT TAGTCATTGT CATTTCGCTT TAGATGAAAA TCTTATGCAA
CAAGGCGCTG ATTATCTTCT CGGTAAACAT GACTTTACCT CGTTTAGAAC GGTGCATTGT
CAATCTCATT CTGCGGTTCG GACTATAAAA CATTGTCGGG TGACACGACA GGGTGATTAT
CTTGTAGTTG ATATCAAAGC CAATGCTTTT TTACACCATA TGGTGCGAAA CGTTGTTGGT
AGCTTAATGC GAGTTGGTCA ATCACAAGAA ACACCACACT GGATGAAAGA AGTTTTATTG
GCTAAAAATC GTTGTGTTGC AGGTGTTACG GCACCACCAG AGGGGCTATA TTTTGTCGAT
GTAGATTACC CTGAGAACTT TGAGTTACCT AAAAGCCGTT TAGGGCCATT GTTTTTATAG
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| Protein sequence | MRYALGIEYD GKNYCGWQRQ NNVITVQEKL EKALSKIADE KIEVVCAGRT DTGVNATNQV
IHFDTEKKRK DTAWTLGVNT HLPSDVAVAW VKKVDDDFHA RFSATARNYR YIIYNKPLRS
AILSHGISHC HFALDENLMQ QGADYLLGKH DFTSFRTVHC QSHSAVRTIK HCRVTRQGDY
LVVDIKANAF LHHMVRNVVG SLMRVGQSQE TPHWMKEVLL AKNRCVAGVT APPEGLYFVD
VDYPENFELP KSRLGPLFL
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