| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3757 |
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| Symbol | |
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| ID | 3520801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3916811 |
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| End bp | 3919585 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286204 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_270424 |
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| Protein GI | 71280336 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.19794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAACA ATAGTAAAGT AGCTAAAGCA ATCCGCGTAG CGATGATGTT CGGAGCTGGT
GCTGCTGCAG CCATTTCAGC ACCAACTTTT GCAGCTGAAG AAGGCGTAGA AGAAGTTGAG
AAAATTGAAG TAACTGGTTC TCGTATCAAA CGTACTGATA TGGAAGCAGC TAGCCCAGTA
AGTATTTTTT CTGCAGCGGA TATCGCAGCA TCTGGTGTTA CTTCATTAGA AGGTTTCATT
AAACAAATCC CAGCAATCAA CGGCGCGCAA CTAGGTTCTA ACGTAAACAA CGCGAGTGCA
GGTTTTGCTA CAGCATCACT TCGTGGTTTA GGTTCAGGCC GTACATTGAT TCTAATCAAT
GGTCGTCGCT TCAACTCTGG CGATTTGAAC TCTATCCCTA CCTCGTTTAT CGAGCGTGTT
GAAGTTGTAC GTGATGGTGC TTCTACTGTA TATGGTTCTG ATGCTATCGC TGGTGTTATT
AACTTTATCA CTAAAAAAGA TTTTGAAGGC CTTGAAGTTA CAGCACAATA TGATGTAACG
GGTGAAGGCG ACGGTGATAC AGCTAAGTTT TCAATCGTAA CAGGTGCCTC TAATGATAAA
GGTAATGTTG TATTCTCTGT AGATTACACT GACCGTGAAG AAGTTACTCA AGCAGACAGA
AAATACTCAG AATGTCCACT TTGGGATGAT GGCGTAGGCT CTACAACATA TTGTGGTGGT
TCATCACATT CTGAATTTGG TCGTGTAAAC TTGCCTAAAG GTTATATTAT CAATGGTGAA
GCAGTTGGCT CTAAAAGACC TGACGATTCA ACTGTTGGTG GACGTTATGT GACGATTGAT
GGAGCAGGTG TTCCTTTTAG CACAGCTGAT CATGGTTATA ACTATGCTGC AACGAGTTAC
TTAGTTACTC CAGTTAAAAT ATTCTCTGTA AATGCTGCGT CTACTTATGA AATATCTGAC
TCAATCACAG CATTTGCTGA AGGTGGTTAT TCAAACCGTC AATCAAGTCA ACAAATGGCA
CCTGCAGCAA CATTCTGGAG TGCTCCAGTA CCCGCTGCTC ACCCTGACAA CATTTATGGT
GTAGATGTTT CAATTAACCG TCGTATCACT GAAGGTGGTG GTCGTGGTTT TGAACAAGAT
ACAAATGATT ACCGCGTAGT TGGTGGTTTA GAAGGTGAAT TTGACAATGG TTGGGGTTGG
GATGTTTCAT ACAACTACTC TCGTTTTGTT GATACACGTG TTAACACCGG TGAATTAAAC
CGTCCAAATA CAGAAACATT ATTAGACCCA GCGTTATGTG CTGCTGATGA AGATTGTCCA
GGTGTATGGA ACCCGTTTGC TAAAGGGACT ATGACTCCAG AACAAAGTGA TTTTTCTACA
GTAACGTTCT CTCCTGTACG TAAAGGTACA ACAACTCAGT TTATGGCTAA CTTATCTGGT
GACCTTGGTG AACTTGAATT ACCAGGTGGT GCTATTCAGT GGGCTGCTGG TTATGAGCGT
CGTACCGAGT ATTACTTAAA TGAACCAGAT GGTGCTGAAG CATTAGGTCA AGTATACGGT
CAAGCTGGTA TAAGAACGGA AGGTGATTAT TCTGTAGAAG AAGTTTATGC AGAATTTAAC
TTCCCAATAT TATCAGGCGT ACCTTTTGCT GAACGTTTAA CGTTTACAGC AGCGGTAAGA
GCTTCTGATT ATAGTAACCT TGATGATAAC GCAACTAACA CAAAGTTTGG TTTTGAGTGG
GAACCTGTAG ATGGTTTATT AACTCGTGCA ACATTTGCAG AGGGCTTTAG AGCGCCAAGC
ATTACTGAGT TATTTGATCC TCAAGAACAA TCTGCGCTTA GCTATACTGA TCCTTGTTGG
GATTATGGCC TAAGCTCAAA TGAAACACTT AAAGCTAACT GTGCAGCAGA TGGTATACCA
GCAGACTTTG ACTCTGATTC TCAATCAAAC GCTATTGTTG GTGGTAACCC TGATTTACAA
GCAGAAGAGT CAGAAAGTCT TACTGTGGGT ATTGTATACT CAGGTATTGA AAACTTCTCG
GTAGCTTTTG ATTACTTTAA TATCAAAATT GAGCAAGGTA TCGGTACTTC TGGTGTAGAT
AATATTGCTA ATGCATGTTA CAACAGCGTT GGATTTTCAG ACGAATTGTG TGATGATATT
AAAGGTAGTA AATTCGGTCC TTTAGATACT CCTCCTCATC CTACATCACC TCGTCGTAAT
GTAAGTGAAG TACTTTCAGG TGTATTGGTA ATTAATGATA ACCTTTCAAC GTTTGAAACT
TCAGGTATTG ATTTTGACTT TAGCTACAAT ATGGACCTTG CTGGTGGTAC ATTTACTACT
ACCTTAAATG GTACATATTT AATGGCTTAT GACTACACGC TAACTGCTGG TAGTGAAACT
ATTGAAGCCG CAGGAATGGT TGCAGCTGAC CAATGGGAAG GTAACCCAGC AGTATTCGCT
GAATGGAGAA CTAACTTAGG TTTTAACTTC GCAACAGATG ACTACTCAGC TAACGTGACT
TTCCGTTACC AATCTGAAGG TGATGATATT AGTGCAACAG ATACTACGTT AGATACAGTA
GCTGACTCTG TAGTTTATAC TGATATCCAA GGTACTTATT ACATCAATGA TACTTACACC
ATCTCTGCTG GTGCACGTAA CTTGTTCGAT GTTAAACCTC CTTACATGTC TAACTACGAT
GATTCGAATA CTGTAAACTA TTCTTATGAT TTAGCGGGTC AATATTTATA TGTTAAAGCT
ACTGCTAGAT TTTAA
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| Protein sequence | MYNNSKVAKA IRVAMMFGAG AAAAISAPTF AAEEGVEEVE KIEVTGSRIK RTDMEAASPV
SIFSAADIAA SGVTSLEGFI KQIPAINGAQ LGSNVNNASA GFATASLRGL GSGRTLILIN
GRRFNSGDLN SIPTSFIERV EVVRDGASTV YGSDAIAGVI NFITKKDFEG LEVTAQYDVT
GEGDGDTAKF SIVTGASNDK GNVVFSVDYT DREEVTQADR KYSECPLWDD GVGSTTYCGG
SSHSEFGRVN LPKGYIINGE AVGSKRPDDS TVGGRYVTID GAGVPFSTAD HGYNYAATSY
LVTPVKIFSV NAASTYEISD SITAFAEGGY SNRQSSQQMA PAATFWSAPV PAAHPDNIYG
VDVSINRRIT EGGGRGFEQD TNDYRVVGGL EGEFDNGWGW DVSYNYSRFV DTRVNTGELN
RPNTETLLDP ALCAADEDCP GVWNPFAKGT MTPEQSDFST VTFSPVRKGT TTQFMANLSG
DLGELELPGG AIQWAAGYER RTEYYLNEPD GAEALGQVYG QAGIRTEGDY SVEEVYAEFN
FPILSGVPFA ERLTFTAAVR ASDYSNLDDN ATNTKFGFEW EPVDGLLTRA TFAEGFRAPS
ITELFDPQEQ SALSYTDPCW DYGLSSNETL KANCAADGIP ADFDSDSQSN AIVGGNPDLQ
AEESESLTVG IVYSGIENFS VAFDYFNIKI EQGIGTSGVD NIANACYNSV GFSDELCDDI
KGSKFGPLDT PPHPTSPRRN VSEVLSGVLV INDNLSTFET SGIDFDFSYN MDLAGGTFTT
TLNGTYLMAY DYTLTAGSET IEAAGMVAAD QWEGNPAVFA EWRTNLGFNF ATDDYSANVT
FRYQSEGDDI SATDTTLDTV ADSVVYTDIQ GTYYINDTYT ISAGARNLFD VKPPYMSNYD
DSNTVNYSYD LAGQYLYVKA TARF
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