Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3739 |
Symbol | bglX |
ID | 3523078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3901095 |
End bp | 3903317 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637286186 |
Product | periplasmic beta-glucosidase |
Protein accession | YP_270406 |
Protein GI | 71282603 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.22686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTATCAA AATCGTGTCA ACAAGTTCAT GAGTTAAATT TTTCGGATGT AGAATCTGAA GTAGTTACAC TGCTATCGAG AATGACTATC GAAGAGAAAA TTGGCCAAAT GAGTCAACTT TCTGGAGATG GATGTATTGT GTCAAAAAAC TTGCGCAAGG CGGTCATAGC TGGACATGTA GGTTCTATTC TTAATGAAGT GGACCTTGAC ACAATTAACG AGTTACAACG GATTGCTATA CAAGAATCAC GACTAGGCAT ACCATTATTA ATTGGTCGAG ATGTGATTCA TGGCTTTAAC ACCATTTTTC CCATACCACT TGCTCAAGCC GCAACATGGT CGCCAAAAAT TGTTGAACGG TGCGCTAAGA TTGCTGCAAT AGAGTCTTCA AATAGTGGTA TAAACTGGAC CTTTGCACCC ATGATCGATA TTGCTCGAGA TCCTCGTTGG GGGAGAATTG CTGAAAGTCT AGGAGAAGAC CCATATTTAT GTAAGACCCT TGCAAACTCA ATGGTAAAAG GGTTTCAGGG TGACAGTTTA TCAGACACAA ATTCAATTGC TGCTTGTGCT AAACATTTTG CAGGCTACGG AGCAAGTGAA GGTGGAAAAG ATTACAACAC AACTAATATT CCAGAAAACG AGCTACGCAA CGTTTATCTC CCCCCATTTA AAGCGATAGC CGAATCCGGA GTTGCCACAT TTATGGCATC TTTCAGCGAT TTAAATGGTG TACCAGTCAC AGGAAATAGC TGGCTTTTAA CGACTGTACT CCGCGACGAA TGGAACTATT CTGGCCCTGT AGTCAGTGAT TGGGAAGCCG TTCCACAGTT AGTCATACAT GGATTTGCCT TCGATGATTA TGACGCTGCA GGTAAAGCAT GTACTGCGGG GATCGACATG GAAATGGCCA GTGATTGTTA CTTGAAACAC ATGAAGCATT TAATGAATAA TAACGTTATC TCCCTAGATA AAATTGACAG TGTTGTAAAA CGAATACTCA CACTGAAATT TAACTTAGGG CTTTTTGAAT CTGCCATTAC ATCCCCAAAT CAACCATCAA ATAGTTTAAA TACAGACCAT CTAAGCATTG CTAAAGAAGC AGTAATAAAA AGTTGTGTCT TGTTAAAAAA TGATAATCAA ATATTACCCA TAGCTAAATC GACAATTAAT ACCCTTGCGG TAATAGGGCC TCTTGCAGAT GATGGTTATG AACAAATGGG CACGTGGGCT TTTGATGGTA AAGAAAACCA AAGCCATACG TGTTTGAATG CATTAAAAGA AGTAGCCAGA AACGCATTTA ATATAAACTA TGCTGTAGGG ATGGAAACCA CGCGTTGCAA CCATCACGAC GGTTTCGCTG AAGCGATTGA TACAGCAATA AATGCAGATA TAGCGTTGAT GTTTTTAGGT GAAGAAGCTA TTTTATCGGG AGAAGCTCAT TGTCGGTCGA GCATCGATTT ACCCGGTGCT CAGGAACAAC TGATTAATGT AATCCACGCA ACGGGGACAC CTATTATTTT GGTGATAATG GCTGGAAGGC CCATTACTTT GGAAAAAATC ATTTCAAAAG TAGATGCCAT TTTGTTTGCA TGGCACCCAG GAACAATGGC AGGTCCTGCT ATCACTGATT TATTGTTTGG GGTAGAAAGT CCGTCAGGAA AATTACCGGT TACCTTTCCT CGAACGGTTG GTCAAATTCC ACTTTATTAT GCACAAAAAA ATTCTGGCAG ACCCCCCATT GATGAAAAAT TTATTAATAT AGATAATATT AAAATGAGAG CGCCACAAAC TTCCTTTGGT ATGACTGCAA CCTATTTAGA TACTCATTTC TCTCCATTAT TTCCTTTTGG CTTTGGCCTA TCCTATAGTC AATTTTGTTA TACAAAGATC AAATTAAATA ATAAAGTGAT TCCTATGGGG GGCGCTGTTG AAGTAAGTGC AACGATTAAC AATGTTGGTA ATTATAATGC AGAAGAGGTA GTTCAACTCT ATATTAGAGA TATTGTTGGT AATGTAACTC GCCCTATAAA AGAGCTTAAG GGTTTTCAAC GAATCACTTT AGGAAAAGGT GAAAGCATGG TAGTCACATT TAAACTACAC ACTGATGAAC TTGCGTTTTA TAACCAACAA ATGGAATATA AACCCGAAGC CGGACTATTC CATGTTTGGA TCGGCGGGGA TTCAAGCACG ACGCTAAAAA CAGAATTTGA AGTGACAGAT TGA
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Protein sequence | MLSKSCQQVH ELNFSDVESE VVTLLSRMTI EEKIGQMSQL SGDGCIVSKN LRKAVIAGHV GSILNEVDLD TINELQRIAI QESRLGIPLL IGRDVIHGFN TIFPIPLAQA ATWSPKIVER CAKIAAIESS NSGINWTFAP MIDIARDPRW GRIAESLGED PYLCKTLANS MVKGFQGDSL SDTNSIAACA KHFAGYGASE GGKDYNTTNI PENELRNVYL PPFKAIAESG VATFMASFSD LNGVPVTGNS WLLTTVLRDE WNYSGPVVSD WEAVPQLVIH GFAFDDYDAA GKACTAGIDM EMASDCYLKH MKHLMNNNVI SLDKIDSVVK RILTLKFNLG LFESAITSPN QPSNSLNTDH LSIAKEAVIK SCVLLKNDNQ ILPIAKSTIN TLAVIGPLAD DGYEQMGTWA FDGKENQSHT CLNALKEVAR NAFNINYAVG METTRCNHHD GFAEAIDTAI NADIALMFLG EEAILSGEAH CRSSIDLPGA QEQLINVIHA TGTPIILVIM AGRPITLEKI ISKVDAILFA WHPGTMAGPA ITDLLFGVES PSGKLPVTFP RTVGQIPLYY AQKNSGRPPI DEKFINIDNI KMRAPQTSFG MTATYLDTHF SPLFPFGFGL SYSQFCYTKI KLNNKVIPMG GAVEVSATIN NVGNYNAEEV VQLYIRDIVG NVTRPIKELK GFQRITLGKG ESMVVTFKLH TDELAFYNQQ MEYKPEAGLF HVWIGGDSST TLKTEFEVTD
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