| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3732 |
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| Symbol | |
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| ID | 3521829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3890497 |
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| End bp | 3891828 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286179 |
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| Product | sugar:cation symporter family protein |
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| Protein accession | YP_270399 |
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| Protein GI | 71281357 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.170381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAACAA TACGAGAAAA AATTGCCTAT GGCTTAGGTG ATACTGCCAG TAATATCATT
TTTCAAACAG TGATGATGTT TTTGCTGATA TTTTATACCG ATGTCGTTGG TCTTTCTCCC
GCGCTGGTGG GTACTTTATT TTTAGTGGTT CGACTTTTTG ATGCGATTAC TGACCCCTTA
ATGGGGGCTA TGGCAGATAG AACTAAAACC CGATGGGGAC AGTTTAGGCC TTATATTTTA
TGGTTAGCGG TGCCTTTTGG CATAATCTCA GTCATGGCAT TTACTACACC GGATTTTTCC
TATAATGGAA AAGTTGTTTA TGCCTTTGCC ACCTACACTT TACTTATGAT TGCGTATACG
GCGATTAATA TCCCGTATTC TGCATTAGGC GGTGTATTAA CAGCAGAGCC TTCTGAGCGT
GTTTCTGTGC AATCTTATCG CTTTGTTTTA GGCATGTTAG GCGGGCTTAT TGTCGCAGCC
AGTACACTTC CGTTAGTTGA GTGGTTTGGT GAAGGTGATA AAGCCAAAGG TTATCAATTA
ACCATGATGG CGATGAGTCT TTTAGGTGTG GTGTTATTTT TATTATGCTT TAGTGGCACT
AATGAAAGGG TCTCCACGCC TGCAGAGCAA AAAACGTCAT TTTTTGATGA CTTAAGATCA
CTTTGGAAAA ATGACCAGTG GCGAATCTTA TGCTTAGCCG GTCTCTTTTT ATTAACGGGA
CAAGTATTAA GAGCGACTTT AGCTATTTAT TATGTGAAAT ATGTTCTTAA TCTCGAACAG
TATATAACTT TGTTTATTAC ACTCGGAATG ATTGGTAGTA TTTTAGGGTG TGCTTTGGCT
CAACCCCTGG CCAAAAAAGT TTGTAAGATC AAAGCGTATA TAACGCTTCA ATTAATCGCA
GCATTCATAT GTGTCATCAG TTATTTTGTC CCTAAAGAAT ATGACATCAT GGCCTTTGCA
TTGTTTTTCC TTTGGAGTTT CTTTTTACAA ATGGCGACAC CATTGTTATG GGCCAAAATG
GCCGATACCA TTGACTATGG CCACTGGAAA ACTGGTGTTC GTATTACGGG AATGGTTTAT
TCTGCCGTGG TGTTTTTTAT TAAGCTGGGT GTCGCTTTTG GTGGCGCTTT TGCCGGTTGG
TTGCTTGCTT ATTATGGCTA CCAAGCCGAT GTTGAACAGA CGGAGGCGAC TCAGCAAGGG
ATCTTATTGT CCTTTACTGT TTATCCTGCA ATTGGCTCAA TTCTAGTAGC TTTAGTGATG
CGTTGGTATG TTCTTGATAA TAAAAGGGTA GAGCAGATTC ATGGTGAGCT CAATGAAGCA
CAACAAGCGT AA
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| Protein sequence | MLTIREKIAY GLGDTASNII FQTVMMFLLI FYTDVVGLSP ALVGTLFLVV RLFDAITDPL
MGAMADRTKT RWGQFRPYIL WLAVPFGIIS VMAFTTPDFS YNGKVVYAFA TYTLLMIAYT
AINIPYSALG GVLTAEPSER VSVQSYRFVL GMLGGLIVAA STLPLVEWFG EGDKAKGYQL
TMMAMSLLGV VLFLLCFSGT NERVSTPAEQ KTSFFDDLRS LWKNDQWRIL CLAGLFLLTG
QVLRATLAIY YVKYVLNLEQ YITLFITLGM IGSILGCALA QPLAKKVCKI KAYITLQLIA
AFICVISYFV PKEYDIMAFA LFFLWSFFLQ MATPLLWAKM ADTIDYGHWK TGVRITGMVY
SAVVFFIKLG VAFGGAFAGW LLAYYGYQAD VEQTEATQQG ILLSFTVYPA IGSILVALVM
RWYVLDNKRV EQIHGELNEA QQA
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