| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3708 |
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| Symbol | |
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| ID | 3521262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3857980 |
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| End bp | 3859308 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286155 |
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| Product | sugar:cation symporter family protein |
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| Protein accession | YP_270375 |
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| Protein GI | 71280793 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAGTG TAAGAGAAAA AATTGCTTAT GGTTTAGGTG ATACTGCCAG TAATATAATC
TTTCAAACGG TAATGATGTT CTTATTACTG TTTTACACTG ACGTTGTTGG TTTATCTCCT
GCTGTGGTTG GTACTATGTT TTTATTCGTA CGACTAATCG ATGCGGTTAC CGATCCAATC
ATGGGCAACT TAGCCGATAA AACCCGCACT AAGTGGGGAC AGTTCCGTCC TTATCTGCTG
TGGTTAGCGC TACCTTTTGC TTTGATCAGT ATATTAGCTT TCACCACACC CGACTTAACC
GGTAATAATA AAGTTATCTA TGCTTTTGTC ACTTATACCC TTCTTATGAT TGCTTATACG
GCAATCAATA TTCCTTATTG TGGTTTAGGT GGTGTTATTA CTGCTGATGC AAAAGAGCGA
GTCACGGTAC AATCATATCG TTTTGTATTT GGTATGTTAG GCGGCGTCAT TGTTGCAGGC
GCAACTATGC CAATGGTGGA ATGGTTTGGC CAAGGCGATA CTGCAAAAGG CTACCAATAT
ACAATGGTCG CAATGAGCAG CTTAGGCGTC GTCTTGTTTT TGTTATGTTT CTTAGGAACA
AAAGAACGAG TAAAACCACC AGAAAACCAA GACTCATCGA TGAAAGAAAA TCTGCAATCA
TTATGGAAGA ATGACCAATG GCGCATATTA TGTATTGCTT CTTTTTATTT ACTCACGGGG
CAAGTTTTAC GCCTTACCCT TGCTGTTTAT TATGTTAAGT ACTTTCTCGG GCGCGAAGAT
TTAATCACGT CATTTTTAAC ACTAGGCGTA GTGGCAAGTA TGATAGGTTG CGCGGTAGCA
CAGCCGCTCG CTAAACGTGT ATGTAAAATA AAAGCCTATA TAGCACTGCA AAGTTTATCC
GCAGTTATAT GCCTAGCGAG TTTTCTTATT TCCCCCAACC AAATTATTCT TGCGTTTGTC
GCCTTTATTT CTTGGAAGTT TTTTCTTGAT ATGGCTTCAC CACTACTGTG GGCAAAAATG
GCAGATACCA TTGACTATGG TCATAAAAAA ACAGGTATTA GGGTAACAGG CCTTGTTTAT
TCTGGCGTAA TATTTTTTAT CAAAATGGGT ATTGCTATTG GTGGTGCACT TGCTGGATGG
TTATTAACTT TTTACGGTTA CCAAGCTGAT TTAGAACAGA GTGAGGCTAC CAAGCAAGGT
TTATTATTAT CATTTACCGT TTTACCTGCA TTAGGTTCAT TTGCTGTAGC TTGGGTAATG
CGAAAATATA CCTTAACCGA ACAAAGAGTC GTTCAAATAC AGGTAGAATT AAGCACGGAG
ACTAAGTAA
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| Protein sequence | MISVREKIAY GLGDTASNII FQTVMMFLLL FYTDVVGLSP AVVGTMFLFV RLIDAVTDPI
MGNLADKTRT KWGQFRPYLL WLALPFALIS ILAFTTPDLT GNNKVIYAFV TYTLLMIAYT
AINIPYCGLG GVITADAKER VTVQSYRFVF GMLGGVIVAG ATMPMVEWFG QGDTAKGYQY
TMVAMSSLGV VLFLLCFLGT KERVKPPENQ DSSMKENLQS LWKNDQWRIL CIASFYLLTG
QVLRLTLAVY YVKYFLGRED LITSFLTLGV VASMIGCAVA QPLAKRVCKI KAYIALQSLS
AVICLASFLI SPNQIILAFV AFISWKFFLD MASPLLWAKM ADTIDYGHKK TGIRVTGLVY
SGVIFFIKMG IAIGGALAGW LLTFYGYQAD LEQSEATKQG LLLSFTVLPA LGSFAVAWVM
RKYTLTEQRV VQIQVELSTE TK
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