Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3705 |
Symbol | |
ID | 3518336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3853455 |
End bp | 3854678 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637286152 |
Product | glucose/galactose transporter family protein |
Protein accession | YP_270372 |
Protein GI | 71277751 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGACA ATAAAAATTT TGCATTCGCT CTAACGTCAT TAACGTCGTT ATTTTTTATG TGGGGGTTTA TAACGTGTCT AAATGATATT TTAATTCCGC ATTTGAAAGG CGTTTTTGAT TTATCTTATA GTCAGGCTAT GTTGGTACAA TTTTGCTTTT TTGGTGCATA TTTCCTTTTT TCATTACCCG CAGGCGCAAT CGTGAAAAAG CTGGGTTATC AAAAAGGTAT TGTTTTAGGG CTGCTCATCG CTGCTATTGG TTGCTTATTT TTCTATCCTG CTGCATCTAT GCATAGTTAT CCCGTTTTCT TGATGGCTTT ATTTATATTG GCTAGTGGTA TTACCTTACT TCAAGTATCA GCTAACCCAT ATGTAAGTAT GTTAGGTGAT GCTAAAACTG CATCATCTCG TTTGACCATG ACACAAGCGT TTAACGCTTT AGGCACAACA GTAGCACCAT TTTTTGGCGC CTTTCTAATT TTAAATGAAG CAGCTGATGC CCTGTCGCCC CAAACGTCAG CAGAATCAGT TCAAATGCCT TATGTTTTTC TAGCAGCTAT GTTATTAGTT CTGGCTGCCG TTTTTGCTTG GTTAAAATTA CCCAATTTAT CCTTGGTCGA AGAAGACGCT CAAAAAGATG AACAAGAGGA TAGTGGCAGT GCATGGCAAT ATCGTCACTT GGTACTCGGT GCTGTTGGTA TCTTCGTCTA TGTTGGTGCT GAAGTTGCTA TTGGTAGCTT TTTGGTCAGC TTTTTTGCCG AGCCTTCGAT TGCTGGTTTA GAAGAATACC AAGCAGCAAA GTATATTGCT TATTATTGGG GAGGAGCTAT GGTAGGACGT TTTATTGGTG CTGCTGTTAT GCAAAAAGTT GCTGCGGGTA GAGCACTATT TTTTAACGCA ACGCTCGCCG TTATATTGAT TTTAGTTGCT GTATTCTCTT CAGGTACACT TGCCATGGTG GCAATTTTGC TTGTTGGTTT ATGTAATTCA ATTATGTTTC CGACAATTTT TAGTTTAGCC ATTCAAGGCT TAGGTAAGCA TACCAGTCAA GGTTCGGGTA TCTTATGTTT AGCAATTGTT GGCGGTGCAA TTATTCCTCT TTTTCAAGGT GTTTTAGCAG ACAATATTGG TGTACAACCT GCCTTTTTAT TACCTATATT CTGCTATTTT TTTATTGCTT ATTACGGTCT ATCAGGCAGT AAAGTAAAAG CGATTGCCAA CTAA
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Protein sequence | MPDNKNFAFA LTSLTSLFFM WGFITCLNDI LIPHLKGVFD LSYSQAMLVQ FCFFGAYFLF SLPAGAIVKK LGYQKGIVLG LLIAAIGCLF FYPAASMHSY PVFLMALFIL ASGITLLQVS ANPYVSMLGD AKTASSRLTM TQAFNALGTT VAPFFGAFLI LNEAADALSP QTSAESVQMP YVFLAAMLLV LAAVFAWLKL PNLSLVEEDA QKDEQEDSGS AWQYRHLVLG AVGIFVYVGA EVAIGSFLVS FFAEPSIAGL EEYQAAKYIA YYWGGAMVGR FIGAAVMQKV AAGRALFFNA TLAVILILVA VFSSGTLAMV AILLVGLCNS IMFPTIFSLA IQGLGKHTSQ GSGILCLAIV GGAIIPLFQG VLADNIGVQP AFLLPIFCYF FIAYYGLSGS KVKAIAN
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