| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3697 |
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| Symbol | |
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| ID | 3518577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3843412 |
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| End bp | 3844815 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637286145 |
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| Product | sugar:cation symporter family protein |
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| Protein accession | YP_270365 |
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| Protein GI | 71278904 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.455392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAA AAATAAAACA GCATCAACTT AACTTAGGCG AGAAAATGGG TTACGCCTGT
GGTGATATCG CCTCAAATTT TTATTGGCGG GTCTTTGATG TATTCCTGTT TATCTTTTAT
ACCGATGTAT TTGGCCTTTC TCCGGCTGCT GTCGGTACTA TGATGCTGGT TACCCGGCTT
ATAGATGCCT TCTCTGATCC ACTGATGGGC GCAATAGCTG ATCGCACTAA AACAAAATTT
GGTAAATTCA GACCCTATTT ACTTTGGGGA ATTATCCCTA TGGTGGCCGC AGGCGTACTT
ACTTTCACCG TACCCGATGT CAGTGATGGT AATAAGTTAA TTTGGGCTTA CGGCACTTAC
ATCTTTATGA TGTTGGCTTA CACCTTCATT AATGTGCCCT ATGGCGCTTT ATTGGGTGTT
ATCACCCCTG ATAGCCAACA AAGAACTACG TTAACAAGCT TTCGTTTTAT TGGTGCGTTT
TCAGGAGGAA GTCTCGTTGC TTATATGACG CCTGAATTGG TCAATTATTT GGGGCAGGGC
AATGAAGCCT TAGGTTGGCA GTATACTATG TTGGTTTATG GTTTAATTGC AGCGGTACTT
TTTGTAATTA CCTTCTTATC CACTACTGAG CGTGTTTCCC CGCCGGCAGA GCAAAAAACA
CCGGTATTGC AGGATTTAAA AGACTTAACG CAGAATAAAC CTTGGAAAGT CTTGTTTGTT
TTAGCCCTTA TTATCATGAT GACCATTTCA TTAAGAGGTA GCACGGGCAC TTTTTATTTT
AAATATTACG TTGAACGTCC TGACTTAATT GGCAGCTTTG CCATGGCTTA TATGATTGCG
TTAGCCATTG GTGCAGCATC CACGCCCCTA TTAACCAAGT TTGTTGATAA ACGTCGCTTG
TTGATGATAT TGATGACTAT TGTTGCGCTA CTTTCGATCA TTTTCTATTT TGTACCAAAC
GACAGTATTA CCTTGATGTA CGTTTTACAA ATAATGATTG GTTTAGCATT GGGACCAAAA
TCACCGTTAG TTTTTTCTAT GTATGCCGAT ACGGCGGATT ACTCGCAGTG GCGAACAGGA
AGACGGGCAA CCGCGATGAT TTTTTCAGCG GCAGCATTTG CTCAAAAGCT TGGCGGTGCC
TTGGCTGGGG CTATGATTGG TTGGTTACTC GCCTCTATGG GGTATGTGGC TAATCAAGTA
CAAACGGGTG TCTCCCAAGA GGGAATTGTG TTGTTGATGA CTTTGATCCC GGCAATTTTT
GCTGCTATTG CCGTACCGTT AATCTACTTT TATCCGTTAG GTGATCAACA ATTAGAAAAA
ATTCAGCAGG AATTATTAGC TCAACAAGAC AAATCTAATA CTGATGATGG TCAGCCAGCT
ATAACAGGAG CTGTTAATGT CTAA
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| Protein sequence | MIKKIKQHQL NLGEKMGYAC GDIASNFYWR VFDVFLFIFY TDVFGLSPAA VGTMMLVTRL
IDAFSDPLMG AIADRTKTKF GKFRPYLLWG IIPMVAAGVL TFTVPDVSDG NKLIWAYGTY
IFMMLAYTFI NVPYGALLGV ITPDSQQRTT LTSFRFIGAF SGGSLVAYMT PELVNYLGQG
NEALGWQYTM LVYGLIAAVL FVITFLSTTE RVSPPAEQKT PVLQDLKDLT QNKPWKVLFV
LALIIMMTIS LRGSTGTFYF KYYVERPDLI GSFAMAYMIA LAIGAASTPL LTKFVDKRRL
LMILMTIVAL LSIIFYFVPN DSITLMYVLQ IMIGLALGPK SPLVFSMYAD TADYSQWRTG
RRATAMIFSA AAFAQKLGGA LAGAMIGWLL ASMGYVANQV QTGVSQEGIV LLMTLIPAIF
AAIAVPLIYF YPLGDQQLEK IQQELLAQQD KSNTDDGQPA ITGAVNV
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