Gene CPS_3667 details

Gene Information

• Locus tag: CPS_3667
• Symbol: rdgB
• ID: 3518349
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 3810422
• End bp: 3811039
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637286115
• Product: rdgB protein
• Protein accession: YP_270335
• Protein GI: 71278756
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0127] Xanthosine triphosphate pyrophosphatase
• TIGRFAM ID: [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAAAG TTGTATTAGC CACAGGAAAT CAAGGTAAAG TTAAAGAATT AGCCCATTTA 
CTGGCTGAGC AATCAATAGA AATAGTACCG CAGAGTGAGT TTGATGTTCC TGAAGTTGCC 
GAAACTGGCA GCACCTTTGT AGAAAATGCC ATTATTAAAG CGCGCCATGC AGCAAAGATC 
ACTGGTTTAC CCGCTATTGC TGATGATTCT GGTTTGGAAG TTGATGCACT AAATGGTGCT 
CCTGGTGTTT ATTCGGCTAG ATACGCGGCA GATATCACTG AAGGTGAGGT CACTGATGAT 
GACAATACCA ACAAACTCTT AACTGCGTTA GCCACTACTC CCGACGAATT ACGCACTGCG 
CGTTTCCACT GTGTTTTGGT TTATATGAAA CATGAGAATG ACCCAACACC ACTTATCTGT 
CATGGTATAT GGGAAGGAAC TATCTCTAGA ACTAAGCAAG GTGAGCAAGG CTTTGGCTAT 
GATCCTGTTT TTTGGCAACA CGATTTACAA ATGTCTTCCG CGCAGCTATC ACGCGAAGTG 
AAAAATAAAC TAAGTCACCG TGGTCAAGCA TTAGCTAAGT TAGTTGAAAA ACTAGCGCTA 
GCTACCTCAT CAAAGTAA 

 

Protein sequence

MSKVVLATGN QGKVKELAHL LAEQSIEIVP QSEFDVPEVA ETGSTFVENA IIKARHAAKI 
TGLPAIADDS GLEVDALNGA PGVYSARYAA DITEGEVTDD DNTNKLLTAL ATTPDELRTA 
RFHCVLVYMK HENDPTPLIC HGIWEGTISR TKQGEQGFGY DPVFWQHDLQ MSSAQLSREV 
KNKLSHRGQA LAKLVEKLAL ATSSK