Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3663 |
Symbol | |
ID | 3522281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3807538 |
End bp | 3808257 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637286111 |
Product | hypothetical protein |
Protein accession | YP_270331 |
Protein GI | 71281809 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.152819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAATG TAAAAGATAA TCTTAATAAA GTTAAAGCGC AAATTCAGCA AGCTTGTCAA CAAAGTGGTC GATTAACTCC CCTTGCAGAA TTATCAAAAC AATCATCTCC AGTATCGCTA CTAGCCGTGA GTAAAACTAA GCCAACTTCA CTTGTTGAAC AAGCGTACCT GGCTGGTCAA CACGATTTTG GTGAAAACTA CCTGCAAGAA GCAGTAGAGA AAATAGCAGA GTTAGCAAAT TTACCTGAGA TAGTTTGGCA CTTTATTGGT CCTATCCAAT CAAATAAAAC AAAACAAATT GCCAGTAACT TCTCTTGGGT TCATAGTGTT GACAGAGAAA AAATAGCCTT GCGTCTTAAT CAACATCTCA CGGATGATAA TTGTCACGAT ACTCCGCTAA ACATTTGTTT ACAAGTCAAT ATTAGCAATG AAGAGTCAAA GTCAGGTATA AGTATTGAGC AGGTTTTTTC TCTTGCTAAA ATTGTTGATA GTTGTGATAA ACTCACCCTA AGAGGCTTAA TGGCTGTTCC TGAAAAAAAT GCCCCTAAAG CCTGTTATGA GCAAATGCAG CAATTGTTTA CCCAACTTAA AAAGCAATAT CCCAGCGTTG ATACTCTCTC TCTTGGCATG TCTAATGATT TAGATAACGC TGTAGCCCAC GGTTCAACCA TGGTGAGAAT TGGCACCGCC ATTTTTGGCG CCAGAGAAAA TAAAATTTAA
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Protein sequence | MINVKDNLNK VKAQIQQACQ QSGRLTPLAE LSKQSSPVSL LAVSKTKPTS LVEQAYLAGQ HDFGENYLQE AVEKIAELAN LPEIVWHFIG PIQSNKTKQI ASNFSWVHSV DREKIALRLN QHLTDDNCHD TPLNICLQVN ISNEESKSGI SIEQVFSLAK IVDSCDKLTL RGLMAVPEKN APKACYEQMQ QLFTQLKKQY PSVDTLSLGM SNDLDNAVAH GSTMVRIGTA IFGARENKI
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