| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3658 |
|---|
| Symbol | cobS |
|---|
| ID | 3521655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3801991 |
|---|
| End bp | 3802878 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637286106 |
|---|
| Product | cobalamin synthase |
|---|
| Protein accession | YP_270326 |
|---|
| Protein GI | 71281184 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0368] Cobalamin-5-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.095174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTAT CAGTGAATGA GCCGCTAAAA AATAAAGTAG CTGCGCAGCT GAATTTATTT
TATTTAGCGT TAAGCTTTTT TACTCGTTTG CCTGTTCCTA AAACCATGCA TTATTCAGAA
GCATTATTAA ATAAAGCTAA TCGATACTTC TCCTTAGTAG GCTTAGTCAC TGGTTTACTG
CTCGCGTTAA GTTATGTCTG TTTTAGTACC TTTTTACCCG CCAATATATC TATATTGTTA
ACTATGACGA TAAGCTTGTT ATTAACAGGC GCTTTTCATG AAGATGGTTT AGCTGATATG
GCTGACGGTA TCGGTGGTGC TTTCACCATA GAAAAACGAC TGACTATTAT GAAAGATAGT
CGTATCGGCA CTTATGGTGC CGTTACCTTA GTGATGGCTT TATTATTAAA ATTTACATTA
CTGGTAAAAC TAGCTGAGCA AGATAGTAAT CACTTACTTT TAGCTATTTT ATTAGCAGAG
GTTTTATCCC GAGCGGTTGC TGGCAGCTTA ATCTCATCTA TGCCCTATGT AAGTGATATT
GAACAAAGTA AGAGTAAACC ATTAGCCCAA GCACAATCCT CATCAGAATT AACTATTTTG
CTCTTGATAG GTCTCGCTCC GCTCATTTTT TATTCTAGTG AAGTGATTTT CTCGTTGTTG
ATCGTTTTAG TGTTGTTTCG TTGGCTTTTT AAGCAATGGC TTATGGCGAG GATAGGAGGT
TTTACTGGTG ACTGTTTAGG TGCCGGGCAG CAACTCTCTG AGTTACTTAT CTATTTAACG
ATCGTTTCTT ATATTAATAA AGATGTATTC ATAGAAGTTG CTCTTACGGG GCACAACTTT
ATGGGACATA GCCTCACAGG ACACAGTTTT ATGGGAATAG TCGGATGA
|
|---|
| Protein sequence | MSVSVNEPLK NKVAAQLNLF YLALSFFTRL PVPKTMHYSE ALLNKANRYF SLVGLVTGLL
LALSYVCFST FLPANISILL TMTISLLLTG AFHEDGLADM ADGIGGAFTI EKRLTIMKDS
RIGTYGAVTL VMALLLKFTL LVKLAEQDSN HLLLAILLAE VLSRAVAGSL ISSMPYVSDI
EQSKSKPLAQ AQSSSELTIL LLIGLAPLIF YSSEVIFSLL IVLVLFRWLF KQWLMARIGG
FTGDCLGAGQ QLSELLIYLT IVSYINKDVF IEVALTGHNF MGHSLTGHSF MGIVG
|
|---|
| |